RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 MBTD1Q05BQ5 628 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 SPIRE1Q08AE8 756 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 NCBP1Q09161 790 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 ELAVL2Q12926 359 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 EMC2Q15006 297 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 EPHA7Q15375 998 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 NAB2Q15742 525 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 MLF2Q15773 248 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 FAM187BQ17R55 369 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 SLC44A4Q53GD3 710 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 ZBTB41Q5SVQ8 909 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 PLA2G4FQ68DD2 849 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 PDXDC1Q6P996 788 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 PARM1Q6UWI2 310 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 Q6ZUG5 572 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 USP53Q70EK8 1073 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 GET4Q7L5D6 327 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 OTUD6AQ7L8S5 288 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 PALB2Q86YC2 1186 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 BLIDQ8IZY5 108 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 TP53I13Q8NBR0 393 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 LNX1Q8TBB1 728 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 FNIP1Q8TF40 1166 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 CPA5Q8WXQ8 436 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 SEC14L1Q92503 715 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 DNASE1L2Q92874 299 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 TMEM143Q96AN5 459 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 ZNF669Q96BR6 464 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 CHAMP1Q96JM3 812 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 CEP170P1Q96L14 293 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 HSD17B14Q9BPX1 270 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 CLSTN3Q9BQT9 956 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 RTKNQ9BST9 563 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 RPP25Q9BUL9 199 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 EIF2AQ9BY44 585 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 CDIP1Q9H305 208 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 ZSWIM4Q9H7M6 989 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 LTB4R2Q9NPC1 389 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 TRPV5Q9NQA5 729 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 XPNPEP1Q9NQW7 623 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 GDE1Q9NZC3 331 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 DDX25Q9UHL0 483 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 SF3B1O75533 1304 aaKnown RBP eCLIP5.62□□□□□ -1.515e-6■■■■■ 76.6
R3HDM1-218ENST00000487294 CFAP47Q6ZTR5 3102 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 NOTCH4Q99466 2003 aa5.62□□□□□ -1.51
R3HDM1-218ENST00000487294 TRAV20A0A0B4J274 112 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 TMEM189-UBE2V1I3L0A0 370 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 FFAR3O14843 346 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 SLC37A4O43826 429 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 SLITRK3O94933 977 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 ADRB1P08588 477 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 SPATA31D3P0C874 917 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 XRCC6P12956 609 aaKnown RBP eCLIP5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 RPS6KB1P23443 525 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 NLRP5P59047 1200 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 ADCY1Q08828 1119 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 TUSC3Q13454 348 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 TFDP1Q14186 410 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 VWA3BQ502W6 1294 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 SPECC1Q5M775 1068 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 LIN9Q5TKA1 542 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 ARID2Q68CP9 1835 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 SLC27A1Q6PCB7 646 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 BLOC1S2Q6QNY1 142 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 SPATA31D4Q6ZUB0 917 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 GRASPQ7Z6J2 395 aaPredicted RBP5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 MILR1Q7Z6M3 343 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 B3GNT8Q7Z7M8 397 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 LINC01356Q8N9X3 169 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 ATRIPQ8WXE1 791 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 HAS1Q92839 578 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 SECISBP2LQ93073 1101 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 ELSPBP1Q96BH3 223 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 ZNF274Q96GC6 653 aaPredicted RBP5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 B3GALT6Q96L58 329 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 NAP1L4Q99733 375 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 LXNQ9BS40 222 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 TTPALQ9BTX7 342 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 SPATA9Q9BWV2 254 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 SLC26A6Q9BXS9 759 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 XYLT2Q9H1B5 865 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 NXF3Q9H4D5 531 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 GPR27Q9NS67 375 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 ANKEF1Q9NU02 776 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 SPATA6Q9NWH7 488 aaPredicted RBP5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 SIRPGQ9P1W8 387 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 NCDNQ9UBB6 729 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 MRPS17Q9Y2R5 130 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 MTF2Q9Y483 593 aaPredicted RBP5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 HES2Q9Y543 173 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 SNX14Q9Y5W7 946 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 CEP295Q9C0D2 2601 aa5.61□□□□□ -1.51
R3HDM1-218ENST00000487294 CNOT1A5YKK6 2376 aaKnown RBP5.6□□□□□ -1.51
R3HDM1-218ENST00000487294 ARHGEF37A1IGU5 675 aa5.6□□□□□ -1.51
R3HDM1-218ENST00000487294 BLACEA4D250 179 aa5.6□□□□□ -1.51
R3HDM1-218ENST00000487294 PTGESO14684 152 aa5.6□□□□□ -1.51
R3HDM1-218ENST00000487294 SLC30A4O14863 429 aa5.6□□□□□ -1.51
R3HDM1-218ENST00000487294 TADA2AO75478 443 aa5.6□□□□□ -1.51
R3HDM1-218ENST00000487294 KRT37O76014 449 aa5.6□□□□□ -1.51
R3HDM1-218ENST00000487294 PAPSS2O95340 614 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms