RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 UBE2OQ9C0C9 1292 aaKnown RBP15.01□□□□□ -0.01
COL9A1-207ENST00000486080 DHX35Q9H5Z1 703 aaKnown RBP15.01□□□□□ -0.01
COL9A1-207ENST00000486080 PCDH18Q9HCL0 1135 aa15.01□□□□□ -0.01
COL9A1-207ENST00000486080 ANLNQ9NQW6 1124 aa15.01□□□□□ -0.01
COL9A1-207ENST00000486080 COMMD8Q9NX08 183 aa15.01□□□□□ -0.01
COL9A1-207ENST00000486080 MTMR10Q9NXD2 777 aa15.01□□□□□ -0.01
COL9A1-207ENST00000486080 FZD10Q9ULW2 581 aa15.01□□□□□ -0.01
COL9A1-207ENST00000486080 C2orf71A6NGG8 1288 aa15□□□□□ -0.01
COL9A1-207ENST00000486080 C5orf67F2Z3F1 127 aa15□□□□□ -0.01
COL9A1-207ENST00000486080 MSI1O43347 362 aaKnown RBP15□□□□□ -0.01
COL9A1-207ENST00000486080 IGLV3-25P01717 112 aa15□□□□□ -0.01
COL9A1-207ENST00000486080 HMGA1P17096 107 aaKnown RBP15□□□□□ -0.01
COL9A1-207ENST00000486080 ALDH1A3P47895 512 aa15□□□□□ -0.01
COL9A1-207ENST00000486080 TUBB4BP68371 445 aa15□□□□□ -0.01
COL9A1-207ENST00000486080 SLC7A5Q01650 507 aa15□□□□□ -0.01
COL9A1-207ENST00000486080 TWF1Q12792 350 aa15□□□□□ -0.01
COL9A1-207ENST00000486080 PPP2R5EQ16537 467 aa15□□□□□ -0.01
COL9A1-207ENST00000486080 PPP6R3Q5H9R7 873 aaPredicted RBP15□□□□□ -0.01
COL9A1-207ENST00000486080 TTC27Q6P3X3 843 aa15□□□□□ -0.01
COL9A1-207ENST00000486080 ARHGAP18Q8N392 663 aa15□□□□□ -0.01
COL9A1-207ENST00000486080 MRPL43Q8N983 215 aaKnown RBP15□□□□□ -0.01
COL9A1-207ENST00000486080 RNF139Q8WU17 664 aa15□□□□□ -0.01
COL9A1-207ENST00000486080 ATG4AQ8WYN0 398 aa15□□□□□ -0.01
COL9A1-207ENST00000486080 PNKPQ96T60 521 aa15□□□□□ -0.01
COL9A1-207ENST00000486080 TLR9Q9NR96 1032 aa15□□□□□ -0.01
COL9A1-207ENST00000486080 INSL5Q9Y5Q6 135 aa15□□□□□ -0.01
COL9A1-207ENST00000486080 RAD51CO43502 376 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 PHF2O75151 1096 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 TBX18O95935 607 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 RARGP13631 454 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 ADRA1BP35368 520 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 IRS1P35568 1242 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 CXCR3P49682 368 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 DYNLT1P63172 113 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 PDK2Q15119 407 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 DPYSL2Q16555 572 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 C8orf74Q6P047 294 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 LILRA6Q6PI73 481 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 GPR161Q8N6U8 529 aaKnown RBP14.99□□□□□ -0.01
COL9A1-207ENST00000486080 FAM71BQ8TC56 605 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 MAGOHBQ96A72 148 aaKnown RBP14.99□□□□□ -0.01
COL9A1-207ENST00000486080 CEP295NLQ96MC4 621 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 SMOC2Q9H3U7 446 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 TLR8Q9NR97 1041 aaKnown RBP14.99□□□□□ -0.01
COL9A1-207ENST00000486080 AMACRQ9UHK6 382 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 DMGDHQ9UI17 866 aaKnown RBP14.99□□□□□ -0.01
COL9A1-207ENST00000486080 FBXW11Q9UKB1 542 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 PCDHA11Q9Y5I1 949 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 IRAK3Q9Y616 596 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 MTCL1Q9Y4B5 1905 aaKnown RBP14.99□□□□□ -0.01
COL9A1-207ENST00000486080 CST8O60676 142 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 ZMYND10O75800 440 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 TJP3O95049 919 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 F9P00740 461 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 ZDHHC11BP0C7U3 371 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 KLRC2P26717 231 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 RGS19P49795 217 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 EIF4EBP2Q13542 120 aaPredicted RBP14.99□□□□□ -0.01
COL9A1-207ENST00000486080 SNX1Q13596 522 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 CYP1B1Q16678 543 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 SND1Q7KZF4 910 aaKnown RBP eCLIP14.99□□□□□ -0.01
COL9A1-207ENST00000486080 RFX6Q8HWS3 928 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 MAP7D3Q8IWC1 876 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 MICAL1Q8TDZ2 1067 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 HAUS1Q96CS2 278 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 TGS1Q96RS0 853 aaKnown RBP14.99□□□□□ -0.01
COL9A1-207ENST00000486080 GDF15Q99988 308 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 PARD6BQ9BYG5 372 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 WDCPQ9H6R7 721 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 CERS4Q9HA82 394 aa14.99□□□□□ -0.01
COL9A1-207ENST00000486080 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.99□□□□□ -0.01
COL9A1-207ENST00000486080 SAE1Q9UBE0 346 aaPredicted RBP14.99□□□□□ -0.01
COL9A1-207ENST00000486080 ANAPC1Q9H1A4 1944 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 H0YGN5 161 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 IRAK2O43187 625 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 RB1P06400 928 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 ADH1AP07327 375 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 CSH1P0DML2 217 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 CSH2P0DML3 217 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 GBP1P32455 592 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 KCNJ1P48048 391 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 UBE3AQ05086 875 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 EFEMP1Q12805 493 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 ANKRD20A8PQ5CZ79 823 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 MSANTD2Q6P1R3 559 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 C12orf50Q8NA57 414 aaPredicted RBP14.98□□□□□ -0.01
COL9A1-207ENST00000486080 MAIP1Q8WWC4 291 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 RNF34Q969K3 372 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 EMILIN2Q9BXX0 1053 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 DCLK3Q9C098 648 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 CCSER2Q9H7U1 834 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 CLIC5Q9NZA1 410 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 MAFFQ9ULX9 164 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 EFR3BQ9Y2G0 817 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 SNX10Q9Y5X0 201 aa14.98□□□□□ -0.01
COL9A1-207ENST00000486080 FAM72CH0Y354 149 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 DYNC1I1O14576 645 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 TTI1O43156 1089 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 CHRNA3P32297 505 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 COILP38432 576 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms