RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 BHLHA9Q7RTU4 235 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 SCUBE3Q8IX30 993 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 ETFBKMTQ8IXQ9 262 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 PGBD3Q8N328 593 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 ZNF276Q8N554 614 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 IL17RCQ8NAC3 791 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 ABCC13Q9NSE7 274 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 SAMSN1Q9NSI8 373 aaKnown RBP18.47■□□□□ 0.55
COL6A1-204ENST00000486023 OLA1Q9NTK5 396 aaKnown RBP18.47■□□□□ 0.55
COL6A1-204ENST00000486023 APEX2Q9UBZ4 518 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 MMP17Q9ULZ9 603 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 ZNF510Q9Y2H8 683 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 GVINP1Q7Z2Y8 2422 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 MYO16Q9Y6X6 1858 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 MSI1O43347 362 aaKnown RBP18.46■□□□□ 0.55
COL6A1-204ENST00000486023 MED7O43513 233 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 TSPAN3O60637 253 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 ERCC5P28715 1186 aaPredicted RBP18.46■□□□□ 0.55
COL6A1-204ENST00000486023 CHKAP35790 457 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 HARS2P49590 506 aaKnown RBP18.46■□□□□ 0.55
COL6A1-204ENST00000486023 DGKGP49619 791 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 CCDC6Q16204 474 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 CRY1Q16526 586 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 MAN2A1Q16706 1144 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 VWA3BQ502W6 1294 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 TMEM92Q6UXU6 159 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 CLEC17AQ6ZS10 378 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 ENOSF1Q7L5Y1 443 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 KBTBD6Q86V97 674 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 PHTF2Q8N3S3 785 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 FAM160A2Q8N612 972 aaPredicted RBP18.46■□□□□ 0.55
COL6A1-204ENST00000486023 ZNF513Q8N8E2 541 aaPredicted RBP18.46■□□□□ 0.55
COL6A1-204ENST00000486023 TERB1Q8NA31 727 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 DDI1Q8WTU0 396 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 GAB3Q8WWW8 586 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 ZNF606Q8WXB4 792 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 TUBGCP2Q9BSJ2 902 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 NDST4Q9H3R1 872 aa18.46■□□□□ 0.55
COL6A1-204ENST00000486023 BCCIPQ9P287 314 aaKnown RBP eCLIP18.46■□□□□ 0.55
COL6A1-204ENST00000486023 KCNJ18B7U540 433 aa18.45■□□□□ 0.54
COL6A1-204ENST00000486023 CYBBP04839 570 aa18.45■□□□□ 0.54
COL6A1-204ENST00000486023 GBP1P32455 592 aa18.45■□□□□ 0.54
COL6A1-204ENST00000486023 KIR2DL1P43626 348 aaPredicted RBP18.45■□□□□ 0.54
COL6A1-204ENST00000486023 ID4P47928 161 aa18.45■□□□□ 0.54
COL6A1-204ENST00000486023 KCNJ12Q14500 433 aa18.45■□□□□ 0.54
COL6A1-204ENST00000486023 EOGTQ5NDL2 527 aa18.45■□□□□ 0.54
COL6A1-204ENST00000486023 CACNA2D4Q7Z3S7 1137 aa18.45■□□□□ 0.54
COL6A1-204ENST00000486023 FAM149B1Q96BN6 582 aa18.45■□□□□ 0.54
COL6A1-204ENST00000486023 PLD4Q96BZ4 506 aa18.45■□□□□ 0.54
COL6A1-204ENST00000486023 HSFY1Q96LI6 401 aa18.45■□□□□ 0.54
COL6A1-204ENST00000486023 DNAJC12Q9UKB3 198 aa18.45■□□□□ 0.54
COL6A1-204ENST00000486023 A0A0A0MRY4 1105 aa18.44■□□□□ 0.54
COL6A1-204ENST00000486023 FAM170AA1A519 330 aa18.44■□□□□ 0.54
COL6A1-204ENST00000486023 ALDH1A2O94788 518 aa18.44■□□□□ 0.54
COL6A1-204ENST00000486023 LTFP02788 710 aa18.44■□□□□ 0.54
COL6A1-204ENST00000486023 RETP07949 1114 aa18.44■□□□□ 0.54
COL6A1-204ENST00000486023 PNMA6AP0CW24 399 aaPredicted RBP18.44■□□□□ 0.54
COL6A1-204ENST00000486023 NCAM1P13591 858 aa18.44■□□□□ 0.54
COL6A1-204ENST00000486023 HNRNPLP14866 589 aaKnown RBP eCLIP18.44■□□□□ 0.54
COL6A1-204ENST00000486023 GPD2P43304 727 aa18.44■□□□□ 0.54
COL6A1-204ENST00000486023 USP39Q53GS9 565 aaKnown RBP18.44■□□□□ 0.54
COL6A1-204ENST00000486023 SDE2Q6IQ49 451 aa18.44■□□□□ 0.54
COL6A1-204ENST00000486023 PASD1Q8IV76 773 aa18.44■□□□□ 0.54
COL6A1-204ENST00000486023 CHPFQ8IZ52 775 aa18.44■□□□□ 0.54
COL6A1-204ENST00000486023 HMGB4Q8WW32 186 aa18.44■□□□□ 0.54
COL6A1-204ENST00000486023 P2RY11Q96G91 374 aa18.44■□□□□ 0.54
COL6A1-204ENST00000486023 FAM81BQ96LP2 452 aa18.44■□□□□ 0.54
COL6A1-204ENST00000486023 ARRDC1-AS1Q9H2J1 176 aa18.44■□□□□ 0.54
COL6A1-204ENST00000486023 POLMQ9NP87 494 aaPredicted RBP18.44■□□□□ 0.54
COL6A1-204ENST00000486023 PARD6AQ9NPB6 346 aa18.44■□□□□ 0.54
COL6A1-204ENST00000486023 MARK1Q9P0L2 795 aa18.44■□□□□ 0.54
COL6A1-204ENST00000486023 AJAP1Q9UKB5 411 aaPredicted RBP18.44■□□□□ 0.54
COL6A1-204ENST00000486023 CNTN6Q9UQ52 1028 aa18.44■□□□□ 0.54
COL6A1-204ENST00000486023 CCDC163A0A0D9SF12 145 aa18.43■□□□□ 0.54
COL6A1-204ENST00000486023 TCRBV21S2A2A0A5A6 115 aa18.43■□□□□ 0.54
COL6A1-204ENST00000486023 BECN2A8MW95 431 aa18.43■□□□□ 0.54
COL6A1-204ENST00000486023 PRRT4C9JH25 899 aa18.43■□□□□ 0.54
COL6A1-204ENST00000486023 CACNG3O60359 315 aa18.43■□□□□ 0.54
COL6A1-204ENST00000486023 ADAM23O75077 832 aa18.43■□□□□ 0.54
COL6A1-204ENST00000486023 RAPGEF1Q13905 1077 aa18.43■□□□□ 0.54
COL6A1-204ENST00000486023 TRIP4Q15650 581 aaPredicted RBP18.43■□□□□ 0.54
COL6A1-204ENST00000486023 EGFLAMQ63HQ2 1017 aa18.43■□□□□ 0.54
COL6A1-204ENST00000486023 SASS6Q6UVJ0 657 aa18.43■□□□□ 0.54
COL6A1-204ENST00000486023 MDGA1Q8NFP4 955 aa18.43■□□□□ 0.54
COL6A1-204ENST00000486023 ADAM32Q8TC27 787 aa18.43■□□□□ 0.54
COL6A1-204ENST00000486023 IRGQQ8WZA9 623 aa18.43■□□□□ 0.54
COL6A1-204ENST00000486023 ACOX2Q99424 681 aa18.43■□□□□ 0.54
COL6A1-204ENST00000486023 TAB2Q9NYJ8 693 aa18.43■□□□□ 0.54
COL6A1-204ENST00000486023 HBS1LQ9Y450 684 aaKnown RBP18.43■□□□□ 0.54
COL6A1-204ENST00000486023 NFE2L3Q9Y4A8 694 aa18.43■□□□□ 0.54
COL6A1-204ENST00000486023 MYOFQ9NZM1 2061 aa18.43■□□□□ 0.54
COL6A1-204ENST00000486023 OTOGLQ3ZCN5 2332 aa18.42■□□□□ 0.54
COL6A1-204ENST00000486023 CAPN9O14815 690 aa18.42■□□□□ 0.54
COL6A1-204ENST00000486023 FBXO21O94952 628 aa18.42■□□□□ 0.54
COL6A1-204ENST00000486023 FYB2Q5VWT5 728 aa18.42■□□□□ 0.54
COL6A1-204ENST00000486023 TRMT11Q7Z4G4 463 aaKnown RBP18.42■□□□□ 0.54
COL6A1-204ENST00000486023 GPR161Q8N6U8 529 aaKnown RBP18.42■□□□□ 0.54
COL6A1-204ENST00000486023 RLN3Q8WXF3 142 aa18.42■□□□□ 0.54
COL6A1-204ENST00000486023 RMDN1Q96DB5 314 aa18.42■□□□□ 0.54
COL6A1-204ENST00000486023 VPS16Q9H269 839 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms