RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 TMEM45AQ9NWC5 275 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 HEY2Q9UBP5 337 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 DDX20Q9UHI6 824 aaKnown RBP4.89□□□□□ -1.63
SMC4-215ENST00000484799 RHPN2P1A8MT19 583 aa4.88□□□□□ -1.63
SMC4-215ENST00000484799 ANXA2P07355 339 aaKnown RBP4.88□□□□□ -1.63
SMC4-215ENST00000484799 PSG1P11464 419 aa4.88□□□□□ -1.63
SMC4-215ENST00000484799 ATF7P17544 494 aaPredicted RBP4.88□□□□□ -1.63
SMC4-215ENST00000484799 GALNSP34059 522 aa4.88□□□□□ -1.63
SMC4-215ENST00000484799 WDR5P61964 334 aaKnown RBP4.88□□□□□ -1.63
SMC4-215ENST00000484799 BFSP2Q13515 415 aa4.88□□□□□ -1.63
SMC4-215ENST00000484799 SEC23BQ15437 767 aa4.88□□□□□ -1.63
SMC4-215ENST00000484799 RRAGBQ5VZM2 374 aa4.88□□□□□ -1.63
SMC4-215ENST00000484799 CHST15Q7LFX5 561 aaPredicted RBP4.88□□□□□ -1.63
SMC4-215ENST00000484799 WDR75Q8IWA0 830 aaKnown RBP4.88□□□□□ -1.63
SMC4-215ENST00000484799 KAT2BQ92831 832 aa4.88□□□□□ -1.63
SMC4-215ENST00000484799 THOC3Q96J01 351 aaKnown RBP4.88□□□□□ -1.63
SMC4-215ENST00000484799 ZFYVE19Q96K21 471 aa4.88□□□□□ -1.63
SMC4-215ENST00000484799 FAM227BQ96M60 508 aa4.88□□□□□ -1.63
SMC4-215ENST00000484799 NLRP4Q96MN2 994 aa4.88□□□□□ -1.63
SMC4-215ENST00000484799 TUBB6Q9BUF5 446 aa4.88□□□□□ -1.63
SMC4-215ENST00000484799 B4DGG1 531 aa4.87□□□□□ -1.63
SMC4-215ENST00000484799 TSPAN6O43657 245 aa4.87□□□□□ -1.63
SMC4-215ENST00000484799 PLAUP00749 431 aa4.87□□□□□ -1.63
SMC4-215ENST00000484799 ATF3P18847 181 aa4.87□□□□□ -1.63
SMC4-215ENST00000484799 CCKARP32238 428 aa4.87□□□□□ -1.63
SMC4-215ENST00000484799 GPR162Q16538 588 aa4.87□□□□□ -1.63
SMC4-215ENST00000484799 P3H1Q32P28 736 aa4.87□□□□□ -1.63
SMC4-215ENST00000484799 EARS2Q5JPH6 523 aaKnown RBP4.87□□□□□ -1.63
SMC4-215ENST00000484799 RUSC1-AS1Q66K80 236 aa4.87□□□□□ -1.63
SMC4-215ENST00000484799 FAM57BQ71RH2 274 aa4.87□□□□□ -1.63
SMC4-215ENST00000484799 TTC30AQ86WT1 665 aa4.87□□□□□ -1.63
SMC4-215ENST00000484799 MBD3L2Q8NHZ7 208 aaPredicted RBP4.87□□□□□ -1.63
SMC4-215ENST00000484799 BCAS4Q8TDM0 211 aa4.87□□□□□ -1.63
SMC4-215ENST00000484799 TRMT61AQ96FX7 289 aaKnown RBP4.87□□□□□ -1.63
SMC4-215ENST00000484799 VCPIP1Q96JH7 1222 aa4.87□□□□□ -1.63
SMC4-215ENST00000484799 ZC3H10Q96K80 434 aaKnown RBP4.87□□□□□ -1.63
SMC4-215ENST00000484799 MSLNLQ96KJ4 702 aa4.87□□□□□ -1.63
SMC4-215ENST00000484799 TRIM2Q9C040 744 aa4.87□□□□□ -1.63
SMC4-215ENST00000484799 UNKQ9C0B0 810 aaKnown RBP4.87□□□□□ -1.63
SMC4-215ENST00000484799 FAM234AQ9H0X4 552 aa4.87□□□□□ -1.63
SMC4-215ENST00000484799 ZBTB26Q9HCK0 441 aa4.87□□□□□ -1.63
SMC4-215ENST00000484799 PCDHGB6Q9Y5F9 930 aa4.87□□□□□ -1.63
SMC4-215ENST00000484799 SPATA31A1Q5TZJ5 1347 aa4.87□□□□□ -1.63
SMC4-215ENST00000484799 LY6G6EA0A0G2JKS1 128 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 ZSCAN9O15535 394 aaPredicted RBP4.86□□□□□ -1.63
SMC4-215ENST00000484799 PRAMEF2O60811 474 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 PQBP1O60828 265 aaKnown RBP4.86□□□□□ -1.63
SMC4-215ENST00000484799 IL18RAPO95256 599 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 PARNO95453 639 aaKnown RBP4.86□□□□□ -1.63
SMC4-215ENST00000484799 IL1R1P14778 569 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 DRD1P21728 446 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 MMP8P22894 467 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 ATICP31939 592 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 HTRA4P83105 476 aaPredicted RBP4.86□□□□□ -1.63
SMC4-215ENST00000484799 GPS1Q13098 491 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 GRM3Q14832 879 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 GLE1Q53GS7 698 aaKnown RBP4.86□□□□□ -1.63
SMC4-215ENST00000484799 FAXCQ5TGI0 409 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 KIAA1161Q6NSJ0 714 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 B4GALNT4Q76KP1 1039 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 MMP21Q8N119 569 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 ZNF548Q8NEK5 533 aaPredicted RBP4.86□□□□□ -1.63
SMC4-215ENST00000484799 TTC17Q96AE7 1141 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 LRRC46Q96FV0 321 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 BTBD1Q9H0C5 482 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 DECR2Q9NUI1 292 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 CHPF2Q9P2E5 772 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 CAPN11Q9UMQ6 739 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 CNTNAP2Q9UHC6 1331 aa4.86□□□□□ -1.63
SMC4-215ENST00000484799 IGLV5-39A0A0G2JS06 123 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 A6NNZ2 444 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 PRPF4O43172 522 aaKnown RBP eCLIP4.85□□□□□ -1.63
SMC4-215ENST00000484799 ALPLP05186 524 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 T-ENOLP0DO92 83 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 CCKBRP32239 447 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 GSTM5P46439 218 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 COPAP53621 1224 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 CFHR1Q03591 330 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 SEMA3BQ13214 749 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 MTX1Q13505 466 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 DNASE1L3Q13609 305 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 SEMA3AQ14563 771 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 BEND5Q7L4P6 421 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 C14orf80Q86SX3 495 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 CCDC33Q8N5R6 958 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 GRAMD1AQ96CP6 724 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 CCDC136Q96JN2 1154 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 FCRL5Q96RD9 977 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 SENP7Q9BQF6 1050 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 APOL5Q9BWW9 433 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 MAGEB5Q9BZ81 275 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 VPS45Q9NRW7 570 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 GEMIN8Q9NWZ8 242 aaKnown RBP4.85□□□□□ -1.63
SMC4-215ENST00000484799 OBP2AQ9NY56 170 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 RGS17Q9UGC6 210 aaPredicted RBP4.85□□□□□ -1.63
SMC4-215ENST00000484799 CORO2BQ9UQ03 480 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 PCDHB2Q9Y5E7 798 aa4.85□□□□□ -1.63
SMC4-215ENST00000484799 COL15A1P39059 1388 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 DPPA5A6NC42 116 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 F8W810 466 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms