RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 ACOT1Q86TX2 421 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 IRF2BP1Q8IU81 584 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 ANKRD20A12PQ8NF67 263 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 FEZF2Q8TBJ5 459 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 MYLPFQ96A32 169 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 ELMO3Q96BJ8 720 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 C8orf48Q96LL4 319 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 FAM81BQ96LP2 452 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 HEXIM2Q96MH2 286 aaKnown RBP9.45□□□□□ -0.9
COL8A1-207ENST00000483969 GCNAQ96QF7 691 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 MED10Q9BTT4 135 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 CD320Q9NPF0 282 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 HCFC1R1Q9NWW0 138 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 GDE1Q9NZC3 331 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 IGSF9Q9P2J2 1179 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 EPS15L1Q9UBC2 864 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 KIAA1257Q9ULG3 409 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 NFE2L3Q9Y4A8 694 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 TRANK1O15050 2925 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 SMTNL1A8MU46 457 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 METTL12A8MUP2 240 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 KCNJ18B7U540 433 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 CYP26A1O43174 497 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 LRRN2O75325 713 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 CILPO75339 1184 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 SOAT2O75908 522 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 CDK11BP21127 795 aaKnown RBP9.44□□□□□ -0.9
COL8A1-207ENST00000483969 SP100P23497 879 aaPredicted RBP9.44□□□□□ -0.9
COL8A1-207ENST00000483969 CDC25CP30307 473 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 CDR1P51861 262 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 MYL5Q02045 173 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 LRMPQ12912 555 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 KCNJ12Q14500 433 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 VWA3BQ502W6 1294 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 ARHGAP15Q53QZ3 475 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 GBP6Q6ZN66 633 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 MTSS1LQ765P7 747 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 CCNJLQ8IV13 435 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 TTC9BQ8N6N2 239 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 ITFG1Q8TB96 612 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 FGF13Q92913 245 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 MCRS1Q96EZ8 462 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 CYFIP2Q96F07 1278 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 TMEM176AQ96HP8 235 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 SPATA17Q96L03 361 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 MYADMQ96S97 322 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 TUBGCP2Q9BSJ2 902 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 B3GNT5Q9BYG0 378 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 DNAJC25Q9H1X3 360 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 ATXN3LQ9H3M9 355 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 NDST4Q9H3R1 872 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 DPEP3Q9H4B8 488 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 CISHQ9NSE2 258 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 SAMSN1Q9NSI8 373 aaKnown RBP9.44□□□□□ -0.9
COL8A1-207ENST00000483969 UXTQ9UBK9 157 aaPredicted RBP9.44□□□□□ -0.9
COL8A1-207ENST00000483969 ZMYM5Q9UJ78 669 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 NME7Q9Y5B8 376 aa9.44□□□□□ -0.9
COL8A1-207ENST00000483969 TDRD15B5MCY1 1934 aaKnown RBP9.43□□□□□ -0.9
COL8A1-207ENST00000483969 A0A096LPE4 126 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 A0A1W2PPZ6 126 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 GTPBP10A4D1E9 387 aaKnown RBP9.43□□□□□ -0.9
COL8A1-207ENST00000483969 SLC38A8A6NNN8 435 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 PI4K2BG5E9Z4 385 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 PES1O00541 588 aaKnown RBP9.43□□□□□ -0.9
COL8A1-207ENST00000483969 DCXO43602 365 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 NOL4O94818 638 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 ATF6P18850 670 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 GABRR2P28476 465 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 SLC8A3P57103 927 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 GCNT1Q02742 428 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 MAP7Q14244 749 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 EXOC3L4Q17RC7 722 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 ZNF394Q53GI3 561 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 TCP11X2Q5H9J9 407 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 DENND5BQ6ZUT9 1274 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 ENOSF1Q7L5Y1 443 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 UBALD2Q8IYN6 164 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 PPM1KQ8N3J5 372 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 LMO3Q8TAP4 145 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 JAKMIP2Q96AA8 810 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 HNRNPABQ99729 332 aaKnown RBP9.43□□□□□ -0.9
COL8A1-207ENST00000483969 LRRC3Q9BY71 257 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 ZNF518BQ9C0D4 1074 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 INTS2Q9H0H0 1204 aaKnown RBP9.43□□□□□ -0.9
COL8A1-207ENST00000483969 KCNK12Q9HB15 430 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 FANCLQ9NW38 375 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 COMMD8Q9NX08 183 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 MAGED2Q9UNF1 606 aaPredicted RBP9.43□□□□□ -0.9
COL8A1-207ENST00000483969 PCDHB4Q9Y5E5 795 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 TCHHQ07283 1943 aa9.43□□□□□ -0.9
COL8A1-207ENST00000483969 CDH23Q9H251 3354 aa9.42□□□□□ -0.9
COL8A1-207ENST00000483969 ANHXE9PGG2 379 aa9.42□□□□□ -0.9
COL8A1-207ENST00000483969 F8VP50 259 aa9.42□□□□□ -0.9
COL8A1-207ENST00000483969 CLDN5O00501 218 aa9.42□□□□□ -0.9
COL8A1-207ENST00000483969 RTN3O95197 1032 aaPredicted RBP9.42□□□□□ -0.9
COL8A1-207ENST00000483969 CAVIN2O95810 425 aa9.42□□□□□ -0.9
COL8A1-207ENST00000483969 HMGA1P17096 107 aaKnown RBP9.42□□□□□ -0.9
COL8A1-207ENST00000483969 CEBPBP17676 345 aa9.42□□□□□ -0.9
COL8A1-207ENST00000483969 DDX6P26196 483 aaKnown RBP eCLIP9.42□□□□□ -0.9
COL8A1-207ENST00000483969 PPP3CCP48454 512 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms