RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 ASAP3Q8TDY4 903 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 GRIN2BQ13224 1484 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 CLDN25C9JDP6 229 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 M0QYV0 167 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 CPNE3O75131 537 aaKnown RBP10.52□□□□□ -0.73
COL12A1-207ENST00000483888 TMEM253P0C7T8 217 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 RAP1GAPP47736 663 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 MTA1Q13330 715 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 RABL6Q3YEC7 729 aaPredicted RBP10.52□□□□□ -0.73
COL12A1-207ENST00000483888 IL31Q6EBC2 164 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 AFTPHQ6ULP2 937 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 SNX32Q86XE0 403 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 CCDC126Q96EE4 140 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 UCKL1Q9NWZ5 548 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 CRKP46108 304 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 PRIM2P49643 509 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 MAPK12P53778 367 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 HPCAP84074 193 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 LACTB2Q53H82 288 aaPredicted RBP10.52□□□□□ -0.73
COL12A1-207ENST00000483888 KLHDC10Q6PID8 442 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 FAM131AQ6UXB0 335 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 ARMCX2Q7L311 632 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 HIPK1Q86Z02 1210 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 PRRG3Q9BZD7 231 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 NEDD4P46934 1319 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 UFL1O94874 794 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 PRKACBP22694 351 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 SMTNL2Q2TAL5 461 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 DUS1LQ6P1R4 473 aaKnown RBP10.52□□□□□ -0.73
COL12A1-207ENST00000483888 AMNQ9BXJ7 453 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 XKR8Q9H6D3 395 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 GNPTGQ9UJJ9 305 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 CENPAP49450 140 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 SLC25A24Q6NUK1 477 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 DENND1BQ6P3S1 775 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 PGM2Q96G03 612 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 CDH19Q9H159 772 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 WDR41Q9HAD4 459 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 PCDH18Q9HCL0 1135 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 KRCC1Q9NPI7 259 aaPredicted RBP10.52□□□□□ -0.73
COL12A1-207ENST00000483888 GPRC5DQ9NZD1 345 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 PPM1BO75688 479 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 RCVRNP35243 200 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 ACADVLP49748 655 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 BCAMP50895 628 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 ZNF667Q5HYK9 610 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 FNBP1LQ5T0N5 605 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 EMC1Q8N766 993 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 DCUN1D1Q96GG9 259 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 TOR4AQ9NXH8 423 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 GTF2A1LQ9UNN4 478 aa10.52□□□□□ -0.73
COL12A1-207ENST00000483888 TFRCP02786 760 aaKnown RBP10.51□□□□□ -0.73
COL12A1-207ENST00000483888 SHBGP04278 402 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 CNTFP26441 200 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 GRIA3P42263 894 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 AGAP9Q5VTM2 703 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 TPTE2Q6XPS3 522 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 VMP1Q96GC9 406 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 GFM1Q96RP9 751 aaKnown RBP10.51□□□□□ -0.73
COL12A1-207ENST00000483888 ZSWIM1Q9BR11 485 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 TIMM44O43615 452 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 EXTL3O43909 919 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 SHOX2O60902 331 aaPredicted RBP10.51□□□□□ -0.73
COL12A1-207ENST00000483888 DHFRP00374 187 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 ZNF267Q14586 743 aaPredicted RBP10.51□□□□□ -0.73
COL12A1-207ENST00000483888 RASAL3Q86YV0 1011 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 SEPT12Q8IYM1 358 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 APOPT1Q96IL0 206 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 DPP3Q9NY33 737 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 UBDO15205 165 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 PPP3CCP48454 512 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 RPL10AP62906 217 aaKnown RBP10.51□□□□□ -0.73
COL12A1-207ENST00000483888 SUZ12Q15022 739 aaKnown RBP10.51□□□□□ -0.73
COL12A1-207ENST00000483888 SWI5Q1ZZU3 235 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 CACHD1Q5VU97 1274 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 FAM160B1Q5W0V3 765 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 ZNF540Q8NDQ6 660 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 S100PBPQ96BU1 408 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 CCDC167Q9P0B6 97 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 EIF4BP23588 611 aaKnown RBP10.51□□□□□ -0.73
COL12A1-207ENST00000483888 ADSLP30566 484 aaPredicted RBP10.51□□□□□ -0.73
COL12A1-207ENST00000483888 HERC3Q15034 1050 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 GPATCH4Q5T3I0 446 aaKnown RBP10.51□□□□□ -0.73
COL12A1-207ENST00000483888 GARNL3Q5VVW2 1013 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 VPS37AQ8NEZ2 397 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 RGS18Q9NS28 235 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 LIMD1Q9UGP4 676 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 CDH9Q9ULB4 789 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 DUOX2Q9NRD8 1548 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 PRKD3O94806 890 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 ALAS1P13196 640 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 SMCO1Q147U7 214 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 PROSER1Q86XN7 944 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 ITFG1Q8TB96 612 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 PNPLA8Q9NP80 782 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 NRBP2Q9NSY0 501 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 FAM49BQ9NUQ9 324 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 EIF3LQ9Y262 564 aaKnown RBP10.51□□□□□ -0.73
COL12A1-207ENST00000483888 PKP3Q9Y446 797 aa10.51□□□□□ -0.73
COL12A1-207ENST00000483888 ARHGEF10O15013 1369 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms