RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 MON1AQ86VX9 555 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 CPA6Q8N4T0 437 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 CCDC26Q8TAB7 109 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 LARP4BQ92615 738 aaKnown RBP6.3□□□□□ -1.4
CSDE1-207ENST00000483407 RAD54LQ92698 747 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 USP13Q92995 863 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-207ENST00000483407 DEPDC7Q96QD5 511 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 FAM83CQ9BQN1 747 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 CCSER1Q9C0I3 900 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 EBF3Q9H4W6 596 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 VPS45Q9NRW7 570 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 TDP1Q9NUW8 608 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 C2orf42Q9NWW7 574 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 DPP3Q9NY33 737 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 GMIPQ9P107 970 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 REV1Q9UBZ9 1251 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 ADAM30Q9UKF2 790 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 AGO2Q9UKV8 859 aaKnown RBP6.3□□□□□ -1.4
CSDE1-207ENST00000483407 MAGED2Q9UNF1 606 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-207ENST00000483407 EXOC7Q9UPT5 735 aa6.3□□□□□ -1.4
CSDE1-207ENST00000483407 TRAV19A0A0A6YYK7 116 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 A0A1W2PQH9 124 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 MEGF11A6BM72 1044 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 SLC22A31A6NKX4 558 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 ANKRD63C9JTQ0 380 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 HUS1O60921 280 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 RHOBTB1O94844 696 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 EGFP01133 1207 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 CKMP06732 381 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 HMGA1P17096 107 aaKnown RBP6.29□□□□□ -1.4
CSDE1-207ENST00000483407 PLCG1P19174 1290 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 GJB2P29033 226 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 LONP1P36776 959 aaKnown RBP6.29□□□□□ -1.4
CSDE1-207ENST00000483407 MPLP40238 635 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 RAP1GAPP47736 663 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 IFNAR2P48551 515 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 CDR1P51861 262 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 TFAMQ00059 246 aaKnown RBP6.29□□□□□ -1.4
CSDE1-207ENST00000483407 MYL7Q01449 175 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 MTF1Q14872 753 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 RABEP1Q15276 862 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 CCDC6Q16204 474 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 FXNQ16595 210 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 ZC2HC1CQ53FD0 456 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-207ENST00000483407 STPG1Q5TH74 334 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 EGFLAMQ63HQ2 1017 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 RNF43Q68DV7 783 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 TXNDC8Q6A555 127 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 TRIM68Q6AZZ1 485 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 FSTL4Q6MZW2 842 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 SLC39A4Q6P5W5 647 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 PKN3Q6P5Z2 889 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 KBTBD6Q86V97 674 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 C11orf74Q86VG3 221 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 LRRTM3Q86VH5 581 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 C12orf40Q86WS4 652 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 KRTAP1-3Q8IUG1 177 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 FMR1NBQ8N0W7 255 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-207ENST00000483407 FSIP1Q8NA03 581 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 WHAMMQ8TF30 809 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 CACTINQ8WUQ7 758 aaKnown RBP6.29□□□□□ -1.4
CSDE1-207ENST00000483407 LEO1Q8WVC0 666 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-207ENST00000483407 POMGNT1Q8WZA1 660 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 HVCN1Q96D96 273 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 ZC3H10Q96K80 434 aaKnown RBP6.29□□□□□ -1.4
CSDE1-207ENST00000483407 FIZ1Q96SL8 496 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 KIF2CQ99661 725 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 P2RY13Q9BPV8 354 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 ACBD6Q9BR61 282 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 PI4K2AQ9BTU6 479 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 TMPRSS13Q9BYE2 586 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 WNT10AQ9GZT5 417 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 ST6GALNAC4Q9H4F1 302 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 TMEM206Q9H813 350 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 HPS4Q9NQG7 708 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 BLOC1S4Q9NUP1 217 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 DUS2Q9NX74 493 aaKnown RBP6.29□□□□□ -1.4
CSDE1-207ENST00000483407 DDX43Q9NXZ2 648 aaKnown RBP6.29□□□□□ -1.4
CSDE1-207ENST00000483407 CCL26Q9Y258 94 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 HIF3AQ9Y2N7 669 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 STYXL1Q9Y6J8 313 aa6.29□□□□□ -1.4
CSDE1-207ENST00000483407 A0A0A0MRY4 1105 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 OTOL1A6NHN0 477 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-207ENST00000483407 TISP43B9A030 160 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 DNAJA2O60884 412 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 NOL4O94818 638 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 APBB3O95704 486 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 LDHAP00338 332 aaKnown RBP6.28□□□□□ -1.4
CSDE1-207ENST00000483407 ARSAP15289 507 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 NME1P15531 152 aaKnown RBP6.28□□□□□ -1.4
CSDE1-207ENST00000483407 GAP43P17677 238 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 PCSK1P29120 753 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 PMLP29590 882 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 POLR2BP30876 1174 aaKnown RBP6.28□□□□□ -1.4
CSDE1-207ENST00000483407 HOXC13P31276 330 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 GBP1P32455 592 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 GJA4P35212 333 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 DDIT3P35638 169 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 LHX1P48742 406 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 GPR15P49685 360 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms