RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 ZNF516Q92618 1163 aa9.98□□□□□ -0.81
SMARCE1-210ENST00000481231 DHX58Q96C10 678 aa9.98□□□□□ -0.81
SMARCE1-210ENST00000481231 TOE1Q96GM8 510 aaKnown RBP9.98□□□□□ -0.81
SMARCE1-210ENST00000481231 NAF1Q96HR8 494 aaKnown RBP9.98□□□□□ -0.81
SMARCE1-210ENST00000481231 MRGPRX1Q96LB2 322 aa9.98□□□□□ -0.81
SMARCE1-210ENST00000481231 GPR174Q9BXC1 333 aa9.98□□□□□ -0.81
SMARCE1-210ENST00000481231 LRRC27Q9C0I9 530 aa9.98□□□□□ -0.81
SMARCE1-210ENST00000481231 CUEDC2Q9H467 287 aa9.98□□□□□ -0.81
SMARCE1-210ENST00000481231 ZSCAN16Q9H4T2 348 aaPredicted RBP9.98□□□□□ -0.81
SMARCE1-210ENST00000481231 CPNE5Q9HCH3 593 aa9.98□□□□□ -0.81
SMARCE1-210ENST00000481231 TBC1D14Q9P2M4 693 aa9.98□□□□□ -0.81
SMARCE1-210ENST00000481231 PCDHGB2Q9Y5G2 931 aa9.98□□□□□ -0.81
SMARCE1-210ENST00000481231 UBE4BO95155 1302 aa9.98□□□□□ -0.81
SMARCE1-210ENST00000481231 CBX4O00257 560 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 KCNK3O14649 394 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 SPTLC2O15270 562 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 BCAT2O15382 392 aaPredicted RBP9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 HOXC11O43248 304 aaPredicted RBP9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 BRINP1O60477 761 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 CD6P30203 668 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 ATICP31939 592 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 HNF1BP35680 557 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 GRK6P43250 576 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 CASP4P49662 377 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 CSRP3P50461 194 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 CDH8P55286 799 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 IL9RQ01113 521 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 AMPD3Q01432 767 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 EHHADHQ08426 723 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 KCNH2Q12809 1159 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 TARDBPQ13148 414 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 HECTD3Q5T447 861 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 ARHGAP40Q5TG30 622 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 DCAF12L1Q5VU92 463 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 IL27RAQ6UWB1 636 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 LAYNQ6UX15 382 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 PAQR9Q6ZVX9 377 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 FAM35AQ86V20 835 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 BBS7Q8IWZ6 715 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 CHPFQ8IZ52 775 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 PDZD8Q8NEN9 1154 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 PLEKHO2Q8TD55 490 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 OVCA2Q8WZ82 227 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 WBP2Q969T9 261 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 OTUB2Q96DC9 234 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 INTS4Q96HW7 963 aaKnown RBP9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 KCNK16Q96T55 309 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 C7orf25Q9BPX7 421 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 CCSER2Q9H7U1 834 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 DMAP1Q9NPF5 467 aaPredicted RBP9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 FOXD4L1Q9NU39 408 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 IL37Q9NZH6 218 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 TFIP11Q9UBB9 837 aaKnown RBP9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 CHORDC1Q9UHD1 332 aaPredicted RBP9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 EIF2B4Q9UI10 523 aaKnown RBP9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 SNX11Q9Y5W9 270 aa9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 UBR5O95071 2799 aaPredicted RBP9.97□□□□□ -0.81
SMARCE1-210ENST00000481231 ZBTB24O43167 697 aaPredicted RBP9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 STX6O43752 255 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 PHACTR2O75167 634 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 TULP3O75386 442 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 ZDHHC11BP0C7U3 371 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 CASP1P29466 404 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 CSNK1EP49674 416 aaKnown RBP9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 PGFP49763 221 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 TUBP50607 506 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 SLC5A3P53794 718 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 SNRPFP62306 86 aaKnown RBP9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 RHDQ02161 417 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 GAD2Q05329 585 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 SUZ12Q15022 739 aaKnown RBP9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 BMT2Q1RMZ1 405 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 KIF19Q2TAC6 998 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 ZNF699Q32M78 642 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 SNX30Q5VWJ9 437 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 SHC4Q6S5L8 630 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 SCARA5Q6ZMJ2 495 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 UNC13DQ70J99 1090 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 ERICH1Q86X53 443 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 TMEM25Q86YD3 366 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 C12orf56Q8IXR9 622 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 FUKQ8N0W3 1084 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 TERB1Q8NA31 727 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 IQUBQ8NA54 791 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 FGF11Q92914 225 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 SYAP1Q96A49 352 aaPredicted RBP9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 ELMO3Q96BJ8 720 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 TMEM176AQ96HP8 235 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 MED10Q9BTT4 135 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 SDCBP2Q9H190 292 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 BLZF1Q9H2G9 400 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 VRTNQ9H8Y1 702 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 KRT82Q9NSB4 513 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 DEC1Q9P2X7 70 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 FTSJ1Q9UET6 329 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 SH3BP1Q9Y3L3 701 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 ATP8B3O60423 1300 aa9.96□□□□□ -0.82
SMARCE1-210ENST00000481231 MYO18AQ92614 2054 aaKnown RBP9.95□□□□□ -0.82
SMARCE1-210ENST00000481231 MYO9AB2RTY4 2548 aa9.95□□□□□ -0.82
SMARCE1-210ENST00000481231 FAM92AA1XBS5 289 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms