RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 ABCC13Q9NSE7 274 aa6.18□□□□□ -1.42
CPS1-207ENST00000479988 SPATA6Q9NWH7 488 aaPredicted RBP6.18□□□□□ -1.42
CPS1-207ENST00000479988 DUS2Q9NX74 493 aaKnown RBP6.18□□□□□ -1.42
CPS1-207ENST00000479988 COQ4Q9Y3A0 265 aa6.18□□□□□ -1.42
CPS1-207ENST00000479988 SRRM3A6NNA2 597 aaPredicted RBP6.17□□□□□ -1.42
CPS1-207ENST00000479988 SMAPO00193 183 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 RASGRF2O14827 1237 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 TLR5O60602 858 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 MAGEC1O60732 1142 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 STAMBPO95630 424 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 AKT1P31749 480 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 PMS2P54278 862 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 RHOAP61586 193 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 PPP3CAQ08209 521 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 MAPK7Q13164 816 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 PIGHQ14442 188 aaPredicted RBP6.17□□□□□ -1.42
CPS1-207ENST00000479988 PCGF5Q86SE9 256 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 SLC13A5Q86YT5 568 aaPredicted RBP6.17□□□□□ -1.42
CPS1-207ENST00000479988 RCOR2Q8IZ40 523 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 CACNA2D3Q8IZS8 1091 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 RASGEF1CQ8N431 466 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 AUTS2Q8WXX7 1259 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 EIF2AQ9BY44 585 aaKnown RBP6.17□□□□□ -1.42
CPS1-207ENST00000479988 PDZD7Q9H5P4 517 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 RGS18Q9NS28 235 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 SNX24Q9Y343 169 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 A0A1B0GUA9 196 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 DHX15O43143 795 aaKnown RBP6.17□□□□□ -1.42
CPS1-207ENST00000479988 LSM8O95777 96 aaKnown RBP6.17□□□□□ -1.42
CPS1-207ENST00000479988 GPD1P21695 349 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 SLC11A1P49279 550 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 DAB2P98082 770 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 MBTD1Q05BQ5 628 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 ORC1Q13415 861 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 IRAK1BP1Q5VVH5 260 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 PHLDB3Q6NSJ2 640 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 JAMLQ86YT9 394 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 CTAGE3PQ8IX95 158 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 B3GALNT2Q8NCR0 500 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 TAS1R2Q8TE23 839 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 SH3KBP1Q96B97 665 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 ZBTB10Q96DT7 871 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 CFAP57Q96MR6 1250 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 PPP1R2P1Q96PQ5 205 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 TSSK1BQ9BXA7 367 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 ABCG4Q9H172 646 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 ARHGEF4Q9NR80 690 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 A0A087WUV0 522 aaPredicted RBP6.17□□□□□ -1.42
CPS1-207ENST00000479988 PSTPIP1O43586 416 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 TSPAN3O60637 253 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 CTSEP14091 401 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 RAP1GAPP47736 663 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 CLCNKBP51801 687 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 DGKEP52429 567 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 IRX5P78411 483 aaPredicted RBP6.17□□□□□ -1.42
CPS1-207ENST00000479988 SP2Q02086 613 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 C1QBPQ07021 282 aaKnown RBP6.17□□□□□ -1.42
CPS1-207ENST00000479988 ADIGQ0VDE8 80 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 USP4Q13107 963 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 ZNF284Q2VY69 593 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 C9orf57Q5W0N0 161 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 B3GNT9Q6UX72 402 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 CEP120Q8N960 986 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 ATP11CQ8NB49 1132 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 HJURPQ8NCD3 748 aaPredicted RBP6.17□□□□□ -1.42
CPS1-207ENST00000479988 TTC8Q8TAM2 541 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 EPS8L1Q8TE68 723 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 CASKIN2Q8WXE0 1202 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 ATP2A3Q93084 1043 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 ZIM3Q96PE6 472 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 FRMD8P1Q9BZ68 369 aaPredicted RBP6.17□□□□□ -1.42
CPS1-207ENST00000479988 CFAP97Q9P2B7 532 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 ANGPTL3Q9Y5C1 460 aa6.17□□□□□ -1.42
CPS1-207ENST00000479988 RBM47A0AV96 593 aaKnown RBP6.16□□□□□ -1.42
CPS1-207ENST00000479988 ESYT3A0FGR9 886 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 CBX4O00257 560 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 TTI1O43156 1089 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 DDX6P26196 483 aaKnown RBP eCLIP6.16□□□□□ -1.42
CPS1-207ENST00000479988 ALDH3A1P30838 453 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 VPS41P49754 854 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 ATP1A2P50993 1020 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 CDH8P55286 799 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 PPP2R2AP63151 447 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 FAAP100Q0VG06 881 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 DDR2Q16832 855 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 CLEC16AQ2KHT3 1053 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 KCTD16Q68DU8 428 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 MMS22LQ6ZRQ5 1243 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 ANKRD33Q7Z3H0 272 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 GSPT2Q8IYD1 628 aaKnown RBP6.16□□□□□ -1.42
CPS1-207ENST00000479988 AFAP1L2Q8N4X5 818 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 KCNK9Q9NPC2 374 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 DNAJC17Q9NVM6 304 aaKnown RBP6.16□□□□□ -1.42
CPS1-207ENST00000479988 TSPAN16Q9UKR8 245 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 PCDHA3Q9Y5H8 950 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 MTA2O94776 668 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 GLI1P08151 1106 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 RARGP13631 454 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 NPR3P17342 541 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 GAD2Q05329 585 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms