RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 LMAN1P49257 510 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 LUMP51884 338 aaPredicted RBP6.2□□□□□ -1.42
RC3H1-204ENST00000479099 POLGP54098 1239 aaPredicted RBP6.2□□□□□ -1.42
RC3H1-204ENST00000479099 ALDH18A1P54886 795 aaKnown RBP6.2□□□□□ -1.42
RC3H1-204ENST00000479099 EIF4A1P60842 406 aaKnown RBP6.2□□□□□ -1.42
RC3H1-204ENST00000479099 GMFBP60983 142 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 KCNJ10P78508 379 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 PPARAQ07869 468 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 SSPNQ14714 243 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 NFIXQ14938 502 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 RAB39AQ14964 217 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 NTRK2Q16620 822 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 TRIM60Q495X7 471 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 NRN1LQ496H8 165 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 HSP90AA5PQ58FG0 334 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 RAB41Q5JT25 222 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 TTC38Q5R3I4 469 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 UNQ6494/PRO21346Q6UXR6 183 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 OTOAQ7RTW8 1153 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 TMEM200AQ86VY9 491 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 WDR63Q8IWG1 891 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 ADGRF2Q8IZF7 708 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 DCBLD1Q8N8Z6 715 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 GLB1L3Q8NCI6 653 aaPredicted RBP6.2□□□□□ -1.42
RC3H1-204ENST00000479099 FBXO15Q8NCQ5 510 aaPredicted RBP6.2□□□□□ -1.42
RC3H1-204ENST00000479099 CNNM3Q8NE01 707 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.2□□□□□ -1.42
RC3H1-204ENST00000479099 SETD6Q8TBK2 473 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 CPT1CQ8TCG5 803 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 NEK9Q8TD19 979 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 MR1Q95460 341 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 LRRC59Q96AG4 307 aaKnown RBP6.2□□□□□ -1.42
RC3H1-204ENST00000479099 SLC22A18Q96BI1 424 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 C3orf49Q96BT1 292 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 COG3Q96JB2 828 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 TUBGCP5Q96RT8 1024 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 ABHD1Q96SE0 405 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 AGAP2Q99490 1192 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 KLHL4Q9C0H6 718 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 TM9SF3Q9HD45 589 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 IL1RAPL2Q9NP60 686 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 DDX4Q9NQI0 724 aaKnown RBP6.2□□□□□ -1.42
RC3H1-204ENST00000479099 PFDN4Q9NQP4 134 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 USP40Q9NVE5 1235 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 SRRDQ9UH36 339 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 CNOT7Q9UIV1 285 aaKnown RBP6.2□□□□□ -1.42
RC3H1-204ENST00000479099 TMEM59LQ9UK28 342 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 PTBP2Q9UKA9 531 aaKnown RBP6.2□□□□□ -1.42
RC3H1-204ENST00000479099 DSEQ9UL01 958 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 ZMYND8Q9ULU4 1186 aaPredicted RBP6.2□□□□□ -1.42
RC3H1-204ENST00000479099 TMED5Q9Y3A6 229 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 SESN1Q9Y6P5 492 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 ZNF804BA4D1E1 1349 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 IGSF1Q8N6C5 1336 aa6.2□□□□□ -1.42
RC3H1-204ENST00000479099 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 CYP2D7A0A087X1C5 515 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 hCG_1809904A0A1W2PP81 198 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 A0A1W2PPE2 198 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 A0A1W2PR64 198 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 URADA6NGE7 173 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 WTIPA6NIX2 430 aaPredicted RBP6.19□□□□□ -1.42
RC3H1-204ENST00000479099 GLOD5A6NK44 160 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 DNM1LO00429 736 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 ZNF263O14978 683 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 FOXP2O15409 715 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 LRRN2O75325 713 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 GUCY1B2O75343 617 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 E2F6O75461 281 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 APOL3O95236 402 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 ABHD16AO95870 558 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 ARF4P18085 180 aaPredicted RBP6.19□□□□□ -1.42
RC3H1-204ENST00000479099 CCNA2P20248 432 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 SAT1P21673 171 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 IL1R2P27930 398 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 GJA4P35212 333 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 CASP3P42574 277 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 MTIF2P46199 727 aaKnown RBP6.19□□□□□ -1.42
RC3H1-204ENST00000479099 SOX8P57073 446 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 COG7P83436 770 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 TLE1Q04724 770 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 RALGDSQ12967 914 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 TARDBPQ13148 414 aaKnown RBP eCLIP6.19□□□□□ -1.42
RC3H1-204ENST00000479099 CAMK2DQ13557 499 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 IRF3Q14653 427 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 NOMO1Q15155 1222 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 MEP1BQ16820 701 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 SLC5A9Q2M3M2 681 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 SUPT20HL1Q3ZLR7 823 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 BOLA3Q53S33 107 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 RAP1GAP2Q684P5 730 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 DRICH1Q6PGQ1 229 aaPredicted RBP6.19□□□□□ -1.42
RC3H1-204ENST00000479099 SUSD1Q6UWL2 747 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 LINC00696Q6ZRV3 163 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 ADGRG6Q86SQ4 1221 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 DNAAF5Q86Y56 855 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 RHOT2Q8IXI1 618 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 ELOA2Q8IYF1 753 aaPredicted RBP6.19□□□□□ -1.42
RC3H1-204ENST00000479099 VPS52Q8N1B4 723 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 Q8N1Y9 231 aa6.19□□□□□ -1.42
RC3H1-204ENST00000479099 RTL3Q8N8U3 475 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms