RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 MYL2P10916 166 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 EIF4BP23588 611 aaKnown RBP14.62□□□□□ -0.07
CCDC78-210ENST00000478979 EDNRBP24530 442 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 ACTR3P61158 418 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 MBTD1Q05BQ5 628 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 PTPN11Q06124 597 aaPredicted RBP14.62□□□□□ -0.07
CCDC78-210ENST00000478979 HADHQ16836 314 aaKnown RBP14.62□□□□□ -0.07
CCDC78-210ENST00000478979 MAP1SQ66K74 1059 aaPredicted RBP14.62□□□□□ -0.07
CCDC78-210ENST00000478979 XYLT1Q86Y38 959 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 PALM2Q8IXS6 379 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 CPT1BQ92523 772 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 FAM167AQ96KS9 214 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 THTPAQ9BU02 230 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 RBPJLQ9UBG7 517 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 NR2E3Q9Y5X4 410 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 RGPD3A6NKT7 1758 aaPredicted RBP14.62□□□□□ -0.07
CCDC78-210ENST00000478979 RGPD4Q7Z3J3 1758 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 CNMDO75829 334 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 DLDP09622 509 aaKnown RBP14.62□□□□□ -0.07
CCDC78-210ENST00000478979 HPCAP84074 193 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 SFSWAPQ12872 951 aaKnown RBP14.62□□□□□ -0.07
CCDC78-210ENST00000478979 MED21Q13503 144 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 PPP6R3Q5H9R7 873 aaPredicted RBP14.62□□□□□ -0.07
CCDC78-210ENST00000478979 C1orf146Q5VVC0 180 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 DARS2Q6PI48 645 aaKnown RBP14.62□□□□□ -0.07
CCDC78-210ENST00000478979 TMPRSS6Q8IU80 811 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 ULK2Q8IYT8 1036 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 PEBP4Q96S96 227 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 MAGEB5Q9BZ81 275 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 SLC7A8Q9UHI5 535 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 XPO7Q9UIA9 1087 aaKnown RBP14.62□□□□□ -0.07
CCDC78-210ENST00000478979 HES2Q9Y543 173 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 MYO18AQ92614 2054 aaKnown RBP14.62□□□□□ -0.07
CCDC78-210ENST00000478979 C3orf70A6NLC5 250 aaPredicted RBP14.62□□□□□ -0.07
CCDC78-210ENST00000478979 E5RJQ4 531 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 H7C0C1 242 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 ATP9BO43861 1147 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 ATP5OP48047 213 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 HNRNPDQ14103 355 aaKnown RBP14.62□□□□□ -0.07
CCDC78-210ENST00000478979 SH3D19Q5HYK7 790 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 PDSS2Q86YH6 399 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 TRIM42Q8IWZ5 723 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 TRIM56Q9BRZ2 755 aaKnown RBP14.62□□□□□ -0.07
CCDC78-210ENST00000478979 FOXP3Q9BZS1 431 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 SUDS3Q9H7L9 328 aaPredicted RBP14.62□□□□□ -0.07
CCDC78-210ENST00000478979 CIDEBQ9UHD4 219 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 SLC24A2Q9UI40 661 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 USP18Q9UMW8 372 aa14.62□□□□□ -0.07
CCDC78-210ENST00000478979 PAPPA2Q9BXP8 1791 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 A0A0J9YVX5 310 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 SMIM31A0A1B0GVY4 71 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 PGM3O95394 542 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 NDST1P52848 882 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 SFT2D3Q587I9 215 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 TSHZ1Q6ZSZ6 1077 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 TREML1Q86YW5 311 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 C7orf31Q8N865 590 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 HPDLQ96IR7 371 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 ZNF232Q9UNY5 417 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 CLUHO75153 1309 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.61□□□□□ -0.07
CCDC78-210ENST00000478979 TM7SF2O76062 418 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 PDGFRAP16234 1089 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 YWHAGP61981 247 aaKnown RBP eCLIP14.61□□□□□ -0.07
CCDC78-210ENST00000478979 IGDCC3Q8IVU1 814 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 ABTB1Q969K4 478 aaPredicted RBP14.61□□□□□ -0.07
CCDC78-210ENST00000478979 CFAP36Q96G28 342 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 WDR83Q9BRX9 315 aaKnown RBP14.61□□□□□ -0.07
CCDC78-210ENST00000478979 B3GNT5Q9BYG0 378 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 FAM49AQ9H0Q0 323 aaPredicted RBP14.61□□□□□ -0.07
CCDC78-210ENST00000478979 VPS11Q9H270 941 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 IFT122Q9HBG6 1241 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 SSU72Q9NP77 194 aaKnown RBP14.61□□□□□ -0.07
CCDC78-210ENST00000478979 DDX56Q9NY93 547 aaKnown RBP14.61□□□□□ -0.07
CCDC78-210ENST00000478979 STRIP2Q9ULQ0 834 aa14.61□□□□□ -0.07
CCDC78-210ENST00000478979 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.6□□□□□ -0.07
CCDC78-210ENST00000478979 FAM237BA0A1B0GVD1 139 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 TGFB3P10600 412 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 AP3M2P53677 418 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 KDSRQ06136 332 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 MORF4L2Q15014 288 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.6□□□□□ -0.07
CCDC78-210ENST00000478979 LZICQ8WZA0 190 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 MTBPQ96DY7 904 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 TMEM176AQ96HP8 235 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 C2orf40Q9H1Z8 148 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 PCDH9Q9HC56 1237 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 PTTG2Q9NZH5 202 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 DNAJB4Q9UDY4 337 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 PLA2G4CQ9UP65 541 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 PPEF2O14830 753 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 FAM155BO75949 473 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 ARF4P18085 180 aaPredicted RBP14.6□□□□□ -0.07
CCDC78-210ENST00000478979 RGS2P41220 211 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 GRM2Q14416 872 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 NOL9Q5SY16 702 aaKnown RBP14.6□□□□□ -0.07
CCDC78-210ENST00000478979 TRNP1Q6NT89 227 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 ACOT1Q86TX2 421 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 SCUBE3Q8IX30 993 aa14.6□□□□□ -0.07
CCDC78-210ENST00000478979 CTAGE3PQ8IX95 158 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms