RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 FBXO28Q9NVF7 368 aa5.77□□□□□ -1.49
UPF3B-203ENST00000478840 AURKAIP1Q9NWT8 199 aaPredicted RBP5.77□□□□□ -1.49
UPF3B-203ENST00000478840 CLIC5Q9NZA1 410 aa5.77□□□□□ -1.49
UPF3B-203ENST00000478840 BAG5Q9UL15 447 aa5.77□□□□□ -1.49
UPF3B-203ENST00000478840 GABRQQ9UN88 632 aa5.77□□□□□ -1.49
UPF3B-203ENST00000478840 SH2B3Q9UQQ2 575 aa5.77□□□□□ -1.49
UPF3B-203ENST00000478840 TDRD9Q8NDG6 1382 aaKnown RBP5.77□□□□□ -1.49
UPF3B-203ENST00000478840 SETD1BQ9UPS6 1966 aaKnown RBP5.76□□□□□ -1.49
UPF3B-203ENST00000478840 A0A1W2PPH5 198 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 A6NCN8 305 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 PGPEP1LA6NFU8 196 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 M0QZQ0 153 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 CDKL5O76039 1030 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 HEXIM1O94992 359 aaKnown RBP5.76□□□□□ -1.49
UPF3B-203ENST00000478840 ERBB2P04626 1255 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 CYP3A4P08684 503 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 DRD1P21728 446 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 MMP8P22894 467 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 CCT4P50991 539 aaKnown RBP5.76□□□□□ -1.49
UPF3B-203ENST00000478840 HNRNPMP52272 730 aaKnown RBP eCLIP5.76□□□□□ -1.49
UPF3B-203ENST00000478840 FAM3BP58499 235 aaPredicted RBP5.76□□□□□ -1.49
UPF3B-203ENST00000478840 ITIH3Q06033 890 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 RESTQ13127 1097 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 SEMA3BQ13214 749 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 PDCLQ13371 301 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 PRICKLE4Q2TBC4 344 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 TEDDM1Q5T9Z0 273 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 GRHL2Q6ISB3 625 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 MAVSQ7Z434 540 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 CAND1Q86VP6 1230 aaKnown RBP5.76□□□□□ -1.49
UPF3B-203ENST00000478840 FAM71DQ8N9W8 422 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 FEZF2Q8TBJ5 459 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 TBC1D22AQ8WUA7 517 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 UCMAQ8WVF2 138 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 NPIPB3Q92617 1050 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 RNF125Q96EQ8 232 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 FAR2Q96K12 515 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 WWC2-AS2Q96NR7 200 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 SERINC2Q96SA4 455 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 ADAM2Q99965 735 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 FUZQ9BT04 418 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 KRTAP9-9Q9BYP9 154 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 KRTAP9-4Q9BYQ2 154 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 ZNF768Q9H5H4 540 aaKnown RBP5.76□□□□□ -1.49
UPF3B-203ENST00000478840 PLEKHA2Q9HB19 425 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 PCDHB7Q9Y5E2 793 aa5.76□□□□□ -1.49
UPF3B-203ENST00000478840 M0QYT0 321 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 KLK10O43240 276 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 VNN1O95497 513 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 ACRV1P26436 265 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 CFPP27918 469 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 THBS4P35443 961 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 CLNS1AP54105 237 aaKnown RBP5.75□□□□□ -1.49
UPF3B-203ENST00000478840 NAP1L1P55209 391 aaKnown RBP5.75□□□□□ -1.49
UPF3B-203ENST00000478840 NXPH1P58417 271 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 TLE3Q04726 772 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 CRHR2Q13324 411 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 P3H1Q32P28 736 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 SLC45A4Q5BKX6 768 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 CBWD5Q5RIA9 395 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 DENND1BQ6P3S1 775 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.75□□□□□ -1.49
UPF3B-203ENST00000478840 TMPRSS6Q8IU80 811 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 ARMC8Q8IUR7 673 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 LRRC56Q8IYG6 542 aaPredicted RBP5.75□□□□□ -1.49
UPF3B-203ENST00000478840 LNX2Q8N448 690 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 PIGSQ96S52 555 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 EIF3CQ99613 913 aaKnown RBP5.75□□□□□ -1.49
UPF3B-203ENST00000478840 XYLT2Q9H1B5 865 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 ACAD9Q9H845 621 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 CD248Q9HCU0 757 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 POLG2Q9UHN1 485 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 HSF4Q9ULV5 492 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 MAP3K2Q9Y2U5 619 aa5.75□□□□□ -1.49
UPF3B-203ENST00000478840 PSMD9O00233 223 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 MUSKO15146 869 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 SPRY2O43597 315 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 LPXNO60711 386 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 ONECUT2O95948 504 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 PDHA1P08559 390 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 CHN1P15882 459 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 RPS6KB1P23443 525 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 DDX6P26196 483 aaKnown RBP eCLIP5.74□□□□□ -1.49
UPF3B-203ENST00000478840 ABCD3P28288 659 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 GKP32189 559 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 LIPAP38571 399 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 PNPLA4P41247 253 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 RPL15P61313 204 aaKnown RBP5.74□□□□□ -1.49
UPF3B-203ENST00000478840 GALNT2Q10471 571 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 TBL3Q12788 808 aaKnown RBP5.74□□□□□ -1.49
UPF3B-203ENST00000478840 DNASE1L3Q13609 305 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 GPR68Q15743 365 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 FAM187BQ17R55 369 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 HS1BP3Q53T59 392 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 ZNF618Q5T7W0 954 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 LIPMQ5VYY2 423 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 ACSM6Q6P461 480 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 VWA1Q6PCB0 445 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 KRT27Q7Z3Y8 459 aa5.74□□□□□ -1.49
UPF3B-203ENST00000478840 GALNT4Q8N4A0 578 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms