RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SP7Q8TDD2 431 aaPredicted RBP15.03■□□□□ -0
COL4A6-206ENST00000477085 AENQ8WTP8 325 aaKnown RBP15.03■□□□□ -0
COL4A6-206ENST00000477085 CASP10Q92851 521 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 ZBED2Q9BTP6 218 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 TRIM31Q9BZY9 425 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 C10orf88Q9H8K7 445 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 ABCC13Q9NSE7 274 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 ARGLU1Q9NWB6 273 aaPredicted RBP15.03■□□□□ -0
COL4A6-206ENST00000477085 CWC15Q9P013 229 aaKnown RBP15.03■□□□□ -0
COL4A6-206ENST00000477085 SFMBT1Q9UHJ3 866 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 NFU1Q9UMS0 254 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 FAM72CH0Y354 149 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 FAM153BP0C7A2 387 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 CXCR3P49682 368 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 OTUD4Q01804 1114 aaKnown RBP15.02□□□□□ -0.01
COL4A6-206ENST00000477085 OASLQ15646 514 aaKnown RBP15.02□□□□□ -0.01
COL4A6-206ENST00000477085 FAM153CQ494X1 144 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 FAM72AQ5TYM5 149 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 FAM72DQ6L9T8 149 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 DRICH1Q6PGQ1 229 aaPredicted RBP15.02□□□□□ -0.01
COL4A6-206ENST00000477085 SPRED2Q7Z698 418 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 MON1AQ86VX9 555 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 FAM72BQ86X60 149 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 PLD5Q8N7P1 536 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 KLHL23Q8NBE8 558 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 GLIS1Q8NBF1 620 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 ATL2Q8NHH9 583 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 SLC35B2Q8TB61 432 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 ACTL9Q8TC94 416 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 GDAP1L1Q96MZ0 367 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 SLC9A7Q96T83 725 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 RAD9AQ99638 391 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 DPH5Q9H2P9 285 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 HOMER3Q9NSC5 361 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 RRN3Q9NYV6 651 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.02□□□□□ -0.01
COL4A6-206ENST00000477085 AFF4Q9UHB7 1163 aaKnown RBP15.02□□□□□ -0.01
COL4A6-206ENST00000477085 FAM153AQ9UHL3 310 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 SLC4A7Q9Y6M7 1214 aa15.02□□□□□ -0.01
COL4A6-206ENST00000477085 SLC38A8A6NNN8 435 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 TP73O15350 636 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 SASH3O75995 380 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 ATF2P15336 505 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 GOT1P17174 413 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 MCM3P25205 808 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 YWHAQP27348 245 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 TAF10Q12962 218 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 BTBD8Q5XKL5 378 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 SLC9A4Q6AI14 798 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 TMCO3Q6UWJ1 677 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 B4GALNT4Q76KP1 1039 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 VSIG1Q86XK7 387 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 MAP7D3Q8IWC1 876 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 NKD2Q969F2 451 aaPredicted RBP15.01□□□□□ -0.01
COL4A6-206ENST00000477085 CSPG4P5Q96PW8 444 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 ZNF670Q9BS34 389 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 ZBP1Q9H171 429 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 FBXO44Q9H4M3 255 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 FAM204AQ9H8W3 233 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 ARFGAP3Q9NP61 516 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 GRHL1Q9NZI5 618 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 SNX24Q9Y343 169 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 MFHAS1Q9Y4C4 1052 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 PCDHB12Q9Y5F1 795 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 SNX10Q9Y5X0 201 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 MSI1O43347 362 aaKnown RBP15.01□□□□□ -0.01
COL4A6-206ENST00000477085 ARHGEF15O94989 841 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 ECEL1O95672 775 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 ATP2A2P16615 1042 aaKnown RBP15.01□□□□□ -0.01
COL4A6-206ENST00000477085 IVDP26440 423 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 PPM1AP35813 382 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 RPL21P46778 160 aaKnown RBP15.01□□□□□ -0.01
COL4A6-206ENST00000477085 KRT17Q04695 432 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 BYSLQ13895 437 aaKnown RBP15.01□□□□□ -0.01
COL4A6-206ENST00000477085 RAB33AQ14088 237 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 TRIP13Q15645 432 aaPredicted RBP15.01□□□□□ -0.01
COL4A6-206ENST00000477085 ARTNQ5T4W7 220 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 PSTKQ8IV42 348 aaKnown RBP15.01□□□□□ -0.01
COL4A6-206ENST00000477085 PHOSPHO2Q8TCD6 241 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 NTAN1Q96AB6 310 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 MAK16Q9BXY0 300 aaKnown RBP15.01□□□□□ -0.01
COL4A6-206ENST00000477085 FUT8Q9BYC5 575 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 SMOC2Q9H3U7 446 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 AAASQ9NRG9 546 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 ETNK2Q9NVF9 386 aa15.01□□□□□ -0.01
COL4A6-206ENST00000477085 UTP11Q9Y3A2 253 aaKnown RBP15.01□□□□□ -0.01
COL4A6-206ENST00000477085 PLXNA3P51805 1871 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 ZNF487B1APH4 448 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 APOC4-APOC2K7ER74 178 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 TEX28O15482 410 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 IRAK2O43187 625 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 TBX18O95935 607 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 F9P00740 461 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 APOC2P02655 101 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 URODP06132 367 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 ETS1P14921 441 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 AMPD1P23109 780 aa15□□□□□ -0.01
COL4A6-206ENST00000477085 DRG2P55039 364 aaKnown RBP15□□□□□ -0.01
COL4A6-206ENST00000477085 VCPP55072 806 aaKnown RBP15□□□□□ -0.01
COL4A6-206ENST00000477085 RPL10AP62906 217 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms