RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 OSER1Q9NX31 292 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 PLK2Q9NYY3 685 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 NXF1Q9UBU9 619 aaKnown RBP12□□□□□ -0.49
BRCA1-213ENST00000476777 LSM7Q9UK45 103 aaKnown RBP12□□□□□ -0.49
BRCA1-213ENST00000476777 SLC27A6Q9Y2P4 619 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 ATP8B3O60423 1300 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 TMEM131Q92545 1883 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 PTPN13Q12923 2485 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 ATXN7O15265 892 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-213ENST00000476777 AP1G2O75843 785 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 BEST1O76090 585 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 ITPKBP27987 946 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 ATP5C1P36542 298 aaKnown RBP11.99□□□□□ -0.49
BRCA1-213ENST00000476777 AFF3P51826 1226 aaKnown RBP11.99□□□□□ -0.49
BRCA1-213ENST00000476777 COPAP53621 1224 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 MFAP3P55082 362 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 CDH8P55286 799 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 GOLGA8FQ08AF8 430 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 GOLGA8DPQ0D2H9 430 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 TRPC3Q13507 836 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 PSMD6Q15008 389 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 BRAPQ7Z569 592 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 RDH13Q8NBN7 331 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 PRCCQ92733 491 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-213ENST00000476777 HPS3Q969F9 1004 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 CCDC127Q96BQ5 260 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 MS4A3Q96HJ5 214 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 TMX3Q96JJ7 454 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 CLIC6Q96NY7 704 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 CGRRF1Q99675 332 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 SMOQ99835 787 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 GZF1Q9H116 711 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-213ENST00000476777 FBXO44Q9H4M3 255 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 PRORYQ9H606 182 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 TLR8Q9NR97 1041 aaKnown RBP11.99□□□□□ -0.49
BRCA1-213ENST00000476777 FBXO2Q9UK22 296 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-213ENST00000476777 SNX11Q9Y5W9 270 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 CLIC4Q9Y696 253 aa11.99□□□□□ -0.49
BRCA1-213ENST00000476777 E9PAM4 449 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 PCDHGA12O60330 932 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 SYNCRIPO60506 623 aaKnown RBP11.98□□□□□ -0.49
BRCA1-213ENST00000476777 PENKP01210 267 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-213ENST00000476777 HLA-EP13747 358 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 PLA2G2AP14555 144 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 ATICP31939 592 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 GRK6P43250 576 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 CYP24A1Q07973 514 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 GEN1Q17RS7 908 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 CCDC157Q569K6 752 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 LARP1BQ659C4 914 aaKnown RBP11.98□□□□□ -0.49
BRCA1-213ENST00000476777 KLHDC10Q6PID8 442 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 DHRS13Q6UX07 377 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 STXBP4Q6ZWJ1 553 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 TMPRSS12Q86WS5 348 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 RBBP8NLQ8NC74 664 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-213ENST00000476777 TNIP3Q96KP6 325 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 PCED1AQ9H1Q7 454 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 VRTNQ9H8Y1 702 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 CSNK1G1Q9HCP0 422 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 SCML2Q9UQR0 700 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 ANKRD6Q9Y2G4 727 aa11.98□□□□□ -0.49
BRCA1-213ENST00000476777 SRPRBQ9Y5M8 271 aaKnown RBP11.98□□□□□ -0.49
BRCA1-213ENST00000476777 A0A087X0B3 334 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 PLK4O00444 970 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 KCNK3O14649 394 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 MDM4O15151 490 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 CYP26A1O43174 497 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 TGFB1I1O43294 461 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 KLKB1P03952 638 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 ACADMP11310 421 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 CCDC130P13994 396 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 PRKCHP24723 683 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 TXLNAP40222 546 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 EIF2S3P41091 472 aaKnown RBP11.97□□□□□ -0.49
BRCA1-213ENST00000476777 STAT6P42226 847 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 PLA2G4AP47712 749 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 MAP3K7CLP57077 242 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 ZNF234Q14588 700 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 KCNT1Q5JUK3 1230 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 FYB2Q5VWT5 728 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 CCDC73Q6ZRK6 1079 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 GPRIN1Q7Z2K8 1008 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 ACOT1Q86TX2 421 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 FAM124AQ86V42 546 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 CACUL1Q86Y37 369 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 CCDC65Q8IXS2 484 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 SLC2A14Q8TDB8 520 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 UCMAQ8WVF2 138 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 SNX19Q92543 992 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 IGSF8Q969P0 613 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 SYAP1Q96A49 352 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-213ENST00000476777 PIWIL1Q96J94 861 aaKnown RBP11.97□□□□□ -0.49
BRCA1-213ENST00000476777 PANK2Q9BZ23 570 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 SDCBP2Q9H190 292 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 C6orf106Q9H6K1 298 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-213ENST00000476777 NMUR1Q9HB89 426 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 OSGEPQ9NPF4 335 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 AGPAT3Q9NRZ7 376 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 DNMT3LQ9UJW3 386 aa11.97□□□□□ -0.49
BRCA1-213ENST00000476777 NUDT5Q9UKK9 219 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms