RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 USP8P40818 1118 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 GPD2P43304 727 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 DGKEP52429 567 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 APBA1Q02410 837 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 TRIP4Q15650 581 aaPredicted RBP11.7□□□□□ -0.54
CKS1B-206ENST00000474215 MEA1Q16626 185 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 ARHGAP44Q17R89 818 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 HSF5Q4G112 596 aaPredicted RBP11.7□□□□□ -0.54
CKS1B-206ENST00000474215 VWA3BQ502W6 1294 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 SMYD5Q6GMV2 418 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 GRAMD4Q6IC98 578 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 DENND1BQ6P3S1 775 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 DENND1CQ8IV53 801 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 FMNL3Q8IVF7 1028 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 TXNDC5Q8NBS9 432 aaKnown RBP11.7□□□□□ -0.54
CKS1B-206ENST00000474215 TSTD1Q8NFU3 115 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 STK32AQ8WU08 396 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 PLD4Q96BZ4 506 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 NDST4Q9H3R1 872 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 DNAJC17Q9NVM6 304 aaKnown RBP11.7□□□□□ -0.54
CKS1B-206ENST00000474215 SFMBT1Q9UHJ3 866 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 GMEB2Q9UKD1 530 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 HBS1LQ9Y450 684 aaKnown RBP11.7□□□□□ -0.54
CKS1B-206ENST00000474215 BECN2A8MW95 431 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 SGK1O00141 431 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 THAP12O43422 761 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 PENKP01210 267 aaPredicted RBP11.69□□□□□ -0.54
CKS1B-206ENST00000474215 LTFP02788 710 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 RETP07949 1114 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 CISD3P0C7P0 127 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 PRKCSHP14314 528 aaPredicted RBP11.69□□□□□ -0.54
CKS1B-206ENST00000474215 GNA15P30679 374 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 ACADSBP45954 432 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 RPL34P49207 117 aaKnown RBP11.69□□□□□ -0.54
CKS1B-206ENST00000474215 HARS2P49590 506 aaKnown RBP11.69□□□□□ -0.54
CKS1B-206ENST00000474215 DGKGP49619 791 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 CRY1Q16526 586 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 HSP90AA4PQ58FG1 418 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 MIIPQ5JXC2 388 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 EOGTQ5NDL2 527 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 C10orf76Q5T2E6 689 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 TMEM92Q6UXU6 159 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 CACNA2D4Q7Z3S7 1137 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.69□□□□□ -0.54
CKS1B-206ENST00000474215 SCUBE3Q8IX30 993 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 CPXM2Q8N436 756 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 FAM160A2Q8N612 972 aaPredicted RBP11.69□□□□□ -0.54
CKS1B-206ENST00000474215 TERB1Q8NA31 727 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 SHC3Q92529 594 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 GOLGA1Q92805 767 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 BHMTQ93088 406 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 MIS12Q9H081 205 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 SIX2Q9NPC8 291 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 ACP6Q9NPH0 428 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 ST7Q9NRC1 585 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 SAMSN1Q9NSI8 373 aaKnown RBP11.69□□□□□ -0.54
CKS1B-206ENST00000474215 PLK2Q9NYY3 685 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 FBXO10Q9UK96 956 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 STARD13Q9Y3M8 1113 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 MYO16Q9Y6X6 1858 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 EP300Q09472 2414 aaPredicted RBP11.69□□□□□ -0.54
CKS1B-206ENST00000474215 FAM186AA6NE01 2351 aa11.69□□□□□ -0.54
CKS1B-206ENST00000474215 GVINP1Q7Z2Y8 2422 aa11.68□□□□□ -0.54
CKS1B-206ENST00000474215 KCNJ18B7U540 433 aa11.68□□□□□ -0.54
CKS1B-206ENST00000474215 SART1O43290 800 aaKnown RBP11.68□□□□□ -0.54
CKS1B-206ENST00000474215 CYBBP04839 570 aa11.68□□□□□ -0.54
CKS1B-206ENST00000474215 TGM1P22735 817 aa11.68□□□□□ -0.54
CKS1B-206ENST00000474215 EEF1GP26641 437 aaKnown RBP11.68□□□□□ -0.54
CKS1B-206ENST00000474215 KCNJ12Q14500 433 aa11.68□□□□□ -0.54
CKS1B-206ENST00000474215 TCP11X2Q5H9J9 407 aa11.68□□□□□ -0.54
CKS1B-206ENST00000474215 FYB2Q5VWT5 728 aa11.68□□□□□ -0.54
CKS1B-206ENST00000474215 MSANTD2Q6P1R3 559 aa11.68□□□□□ -0.54
CKS1B-206ENST00000474215 RBM43Q6ZSC3 357 aaKnown RBP11.68□□□□□ -0.54
CKS1B-206ENST00000474215 TRMT11Q7Z4G4 463 aaKnown RBP11.68□□□□□ -0.54
CKS1B-206ENST00000474215 RASSF3Q86WH2 238 aa11.68□□□□□ -0.54
CKS1B-206ENST00000474215 ZNF513Q8N8E2 541 aaPredicted RBP11.68□□□□□ -0.54
CKS1B-206ENST00000474215 ENOX1Q8TC92 643 aaKnown RBP11.68□□□□□ -0.54
CKS1B-206ENST00000474215 CLEC4CQ8WTT0 213 aa11.68□□□□□ -0.54
CKS1B-206ENST00000474215 P2RY11Q96G91 374 aa11.68□□□□□ -0.54
CKS1B-206ENST00000474215 ZC3H10Q96K80 434 aaKnown RBP11.68□□□□□ -0.54
CKS1B-206ENST00000474215 SLC4A5Q9BY07 1137 aa11.68□□□□□ -0.54
CKS1B-206ENST00000474215 POLMQ9NP87 494 aaPredicted RBP11.68□□□□□ -0.54
CKS1B-206ENST00000474215 DNAJC12Q9UKB3 198 aa11.68□□□□□ -0.54
CKS1B-206ENST00000474215 HCN2Q9UL51 889 aa11.68□□□□□ -0.54
CKS1B-206ENST00000474215 SLC27A6Q9Y2P4 619 aa11.68□□□□□ -0.54
CKS1B-206ENST00000474215 NFE2L3Q9Y4A8 694 aa11.68□□□□□ -0.54
CKS1B-206ENST00000474215 DMXL1Q9Y485 3027 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 GPR179Q6PRD1 2367 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 PRRT4C9JH25 899 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 FOXN3O00409 490 aaPredicted RBP11.67□□□□□ -0.54
CKS1B-206ENST00000474215 PES1O00541 588 aaKnown RBP11.67□□□□□ -0.54
CKS1B-206ENST00000474215 MSI1O43347 362 aaKnown RBP11.67□□□□□ -0.54
CKS1B-206ENST00000474215 LRP3O75074 770 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 ADAM23O75077 832 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 ALDH1A2O94788 518 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 FYNP06241 537 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 HNRNPLP14866 589 aaKnown RBP eCLIP11.67□□□□□ -0.54
CKS1B-206ENST00000474215 PTK2Q05397 1052 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 SPEM2Q0P670 501 aa11.67□□□□□ -0.54
CKS1B-206ENST00000474215 USP39Q53GS9 565 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms