RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 FMNL3Q8IVF7 1028 aa18.77■□□□□ 0.6
UPF3A-203ENST00000474056 FAM114A1Q8IWE2 563 aa18.77■□□□□ 0.6
UPF3A-203ENST00000474056 ALLCQ8N6M5 410 aa18.77■□□□□ 0.6
UPF3A-203ENST00000474056 IL17RCQ8NAC3 791 aa18.77■□□□□ 0.6
UPF3A-203ENST00000474056 HSFY1Q96LI6 401 aa18.77■□□□□ 0.6
UPF3A-203ENST00000474056 XPO6Q96QU8 1125 aaKnown RBP18.77■□□□□ 0.6
UPF3A-203ENST00000474056 DCLK3Q9C098 648 aa18.77■□□□□ 0.6
UPF3A-203ENST00000474056 SIX2Q9NPC8 291 aa18.77■□□□□ 0.6
UPF3A-203ENST00000474056 ABCC13Q9NSE7 274 aa18.77■□□□□ 0.6
UPF3A-203ENST00000474056 AGO1Q9UL18 857 aaKnown RBP18.77■□□□□ 0.6
UPF3A-203ENST00000474056 CEP250Q9BV73 2442 aa18.76■□□□□ 0.59
UPF3A-203ENST00000474056 PLXND1Q9Y4D7 1925 aa18.76■□□□□ 0.59
UPF3A-203ENST00000474056 TBC1D3BA6NDS4 549 aa18.76■□□□□ 0.59
UPF3A-203ENST00000474056 AXIN1O15169 862 aa18.76■□□□□ 0.59
UPF3A-203ENST00000474056 LETM1O95202 739 aaPredicted RBP18.76■□□□□ 0.59
UPF3A-203ENST00000474056 APBB3O95704 486 aa18.76■□□□□ 0.59
UPF3A-203ENST00000474056 PRKCSHP14314 528 aaPredicted RBP18.76■□□□□ 0.59
UPF3A-203ENST00000474056 GNA15P30679 374 aa18.76■□□□□ 0.59
UPF3A-203ENST00000474056 TNFRSF4P43489 277 aa18.76■□□□□ 0.59
UPF3A-203ENST00000474056 CRY1Q16526 586 aa18.76■□□□□ 0.59
UPF3A-203ENST00000474056 MIIPQ5JXC2 388 aa18.76■□□□□ 0.59
UPF3A-203ENST00000474056 GRAMD4Q6IC98 578 aa18.76■□□□□ 0.59
UPF3A-203ENST00000474056 TMEM92Q6UXU6 159 aa18.76■□□□□ 0.59
UPF3A-203ENST00000474056 DENND1CQ8IV53 801 aa18.76■□□□□ 0.59
UPF3A-203ENST00000474056 TXNDC5Q8NBS9 432 aaKnown RBP18.76■□□□□ 0.59
UPF3A-203ENST00000474056 TSTD1Q8NFU3 115 aa18.76■□□□□ 0.59
UPF3A-203ENST00000474056 RNF139Q8WU17 664 aa18.76■□□□□ 0.59
UPF3A-203ENST00000474056 GAB3Q8WWW8 586 aa18.76■□□□□ 0.59
UPF3A-203ENST00000474056 PLD4Q96BZ4 506 aa18.76■□□□□ 0.59
UPF3A-203ENST00000474056 SAMSN1Q9NSI8 373 aaKnown RBP18.76■□□□□ 0.59
UPF3A-203ENST00000474056 WDR35Q9P2L0 1181 aa18.76■□□□□ 0.59
UPF3A-203ENST00000474056 CEP192Q8TEP8 1941 aa18.76■□□□□ 0.59
UPF3A-203ENST00000474056 SGK1O00141 431 aa18.75■□□□□ 0.59
UPF3A-203ENST00000474056 MSI1O43347 362 aaKnown RBP18.75■□□□□ 0.59
UPF3A-203ENST00000474056 THAP12O43422 761 aa18.75■□□□□ 0.59
UPF3A-203ENST00000474056 RPP40O75818 363 aaKnown RBP18.75■□□□□ 0.59
UPF3A-203ENST00000474056 USP8P40818 1118 aa18.75■□□□□ 0.59
UPF3A-203ENST00000474056 TRIP4Q15650 581 aaPredicted RBP18.75■□□□□ 0.59
UPF3A-203ENST00000474056 PREPLQ4J6C6 727 aaPredicted RBP18.75■□□□□ 0.59
UPF3A-203ENST00000474056 C10orf76Q5T2E6 689 aa18.75■□□□□ 0.59
UPF3A-203ENST00000474056 DENND1BQ6P3S1 775 aa18.75■□□□□ 0.59
UPF3A-203ENST00000474056 RBM43Q6ZSC3 357 aaKnown RBP18.75■□□□□ 0.59
UPF3A-203ENST00000474056 TOGARAM2Q6ZUX3 1019 aa18.75■□□□□ 0.59
UPF3A-203ENST00000474056 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.75■□□□□ 0.59
UPF3A-203ENST00000474056 ZNF606Q8WXB4 792 aa18.75■□□□□ 0.59
UPF3A-203ENST00000474056 IRGQQ8WZA9 623 aa18.75■□□□□ 0.59
UPF3A-203ENST00000474056 SHC3Q92529 594 aa18.75■□□□□ 0.59
UPF3A-203ENST00000474056 FAM81BQ96LP2 452 aa18.75■□□□□ 0.59
UPF3A-203ENST00000474056 TUBGCP2Q9BSJ2 902 aa18.75■□□□□ 0.59
UPF3A-203ENST00000474056 TPSD1Q9BZJ3 242 aa18.75■□□□□ 0.59
UPF3A-203ENST00000474056 MIS12Q9H081 205 aa18.75■□□□□ 0.59
UPF3A-203ENST00000474056 NDST4Q9H3R1 872 aa18.75■□□□□ 0.59
UPF3A-203ENST00000474056 ST7Q9NRC1 585 aa18.75■□□□□ 0.59
UPF3A-203ENST00000474056 EBF1Q9UH73 591 aa18.75■□□□□ 0.59
UPF3A-203ENST00000474056 HCN2Q9UL51 889 aa18.75■□□□□ 0.59
UPF3A-203ENST00000474056 KCNJ18B7U540 433 aa18.74■□□□□ 0.59
UPF3A-203ENST00000474056 MED7O43513 233 aa18.74■□□□□ 0.59
UPF3A-203ENST00000474056 ADAM23O75077 832 aa18.74■□□□□ 0.59
UPF3A-203ENST00000474056 LTFP02788 710 aa18.74■□□□□ 0.59
UPF3A-203ENST00000474056 CHKAP35790 457 aa18.74■□□□□ 0.59
UPF3A-203ENST00000474056 RPL34P49207 117 aaKnown RBP18.74■□□□□ 0.59
UPF3A-203ENST00000474056 DGKGP49619 791 aa18.74■□□□□ 0.59
UPF3A-203ENST00000474056 DGKEP52429 567 aa18.74■□□□□ 0.59
UPF3A-203ENST00000474056 KCNJ12Q14500 433 aa18.74■□□□□ 0.59
UPF3A-203ENST00000474056 MEA1Q16626 185 aa18.74■□□□□ 0.59
UPF3A-203ENST00000474056 HSF5Q4G112 596 aaPredicted RBP18.74■□□□□ 0.59
UPF3A-203ENST00000474056 VWA3BQ502W6 1294 aa18.74■□□□□ 0.59
UPF3A-203ENST00000474056 FYB2Q5VWT5 728 aa18.74■□□□□ 0.59
UPF3A-203ENST00000474056 ANO7Q6IWH7 933 aa18.74■□□□□ 0.59
UPF3A-203ENST00000474056 MSANTD2Q6P1R3 559 aa18.74■□□□□ 0.59
UPF3A-203ENST00000474056 FAM160A2Q8N612 972 aaPredicted RBP18.74■□□□□ 0.59
UPF3A-203ENST00000474056 ZNF513Q8N8E2 541 aaPredicted RBP18.74■□□□□ 0.59
UPF3A-203ENST00000474056 PARD6AQ9NPB6 346 aa18.74■□□□□ 0.59
UPF3A-203ENST00000474056 CYTH4Q9UIA0 394 aa18.74■□□□□ 0.59
UPF3A-203ENST00000474056 HBS1LQ9Y450 684 aaKnown RBP18.74■□□□□ 0.59
UPF3A-203ENST00000474056 DCHS1Q96JQ0 3298 aa18.73■□□□□ 0.59
UPF3A-203ENST00000474056 PRRT4C9JH25 899 aa18.73■□□□□ 0.59
UPF3A-203ENST00000474056 FBXO21O94952 628 aa18.73■□□□□ 0.59
UPF3A-203ENST00000474056 PENKP01210 267 aaPredicted RBP18.73■□□□□ 0.59
UPF3A-203ENST00000474056 RETP07949 1114 aa18.73■□□□□ 0.59
UPF3A-203ENST00000474056 CISD3P0C7P0 127 aa18.73■□□□□ 0.59
UPF3A-203ENST00000474056 TGM1P22735 817 aa18.73■□□□□ 0.59
UPF3A-203ENST00000474056 SPEM2Q0P670 501 aa18.73■□□□□ 0.59
UPF3A-203ENST00000474056 CT47A1Q5JQC4 288 aaPredicted RBP18.73■□□□□ 0.59
UPF3A-203ENST00000474056 DPY19L2P1Q6NXN4 242 aa18.73■□□□□ 0.59
UPF3A-203ENST00000474056 KBTBD6Q86V97 674 aa18.73■□□□□ 0.59
UPF3A-203ENST00000474056 RASSF3Q86WH2 238 aa18.73■□□□□ 0.59
UPF3A-203ENST00000474056 FAM217AQ8IXS0 508 aa18.73■□□□□ 0.59
UPF3A-203ENST00000474056 CPXM2Q8N436 756 aa18.73■□□□□ 0.59
UPF3A-203ENST00000474056 MDGA1Q8NFP4 955 aa18.73■□□□□ 0.59
UPF3A-203ENST00000474056 FBXO10Q9UK96 956 aa18.73■□□□□ 0.59
UPF3A-203ENST00000474056 DNAJC12Q9UKB3 198 aa18.73■□□□□ 0.59
UPF3A-203ENST00000474056 NFE2L3Q9Y4A8 694 aa18.73■□□□□ 0.59
UPF3A-203ENST00000474056 DMXL1Q9Y485 3027 aa18.73■□□□□ 0.59
UPF3A-203ENST00000474056 GOLGA6L22H0YM25 854 aa18.72■□□□□ 0.59
UPF3A-203ENST00000474056 DCLK1O15075 740 aa18.72■□□□□ 0.59
UPF3A-203ENST00000474056 FYNP06241 537 aa18.72■□□□□ 0.59
UPF3A-203ENST00000474056 PNMA6AP0CW24 399 aaPredicted RBP18.72■□□□□ 0.59
UPF3A-203ENST00000474056 KCNMA1Q12791 1236 aa18.72■□□□□ 0.59
UPF3A-203ENST00000474056 EOGTQ5NDL2 527 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms