RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 RIPK2O43353 540 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 UPP2O95045 317 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 CXCL10P02778 98 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 GRIK1P39086 918 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 ATP5OP48047 213 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 SLC5A3P53794 718 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 ROR1Q01973 937 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 DNAJC21Q5F1R6 531 aaKnown RBP18.71■□□□□ 0.59
VARS2-206ENST00000473916 ANKRD22Q5VYY1 191 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 DARS2Q6PI48 645 aaKnown RBP18.71■□□□□ 0.59
VARS2-206ENST00000473916 NPAS4Q8IUM7 802 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 APBB2Q92870 758 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 NCAPGQ9BPX3 1015 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 FRMD8P1Q9BZ68 369 aaPredicted RBP18.71■□□□□ 0.59
VARS2-206ENST00000473916 FAM129AQ9BZQ8 928 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 TMBIM4Q9HC24 238 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 ATP11BQ9Y2G3 1177 aa18.71■□□□□ 0.59
VARS2-206ENST00000473916 DCDC2CA8MYV0 355 aa18.7■□□□□ 0.58
VARS2-206ENST00000473916 ACSL3O95573 720 aa18.7■□□□□ 0.58
VARS2-206ENST00000473916 SLMAPQ14BN4 828 aa18.7■□□□□ 0.58
VARS2-206ENST00000473916 MAPRE1Q15691 268 aaKnown RBP18.7■□□□□ 0.58
VARS2-206ENST00000473916 RNASEH2BQ5TBB1 312 aaKnown RBP18.7■□□□□ 0.58
VARS2-206ENST00000473916 BSPRYQ5W0U4 402 aa18.7■□□□□ 0.58
VARS2-206ENST00000473916 DENND2CQ68D51 928 aa18.7■□□□□ 0.58
VARS2-206ENST00000473916 PM20D1Q6GTS8 502 aa18.7■□□□□ 0.58
VARS2-206ENST00000473916 SCN4BQ8IWT1 228 aa18.7■□□□□ 0.58
VARS2-206ENST00000473916 DDIT4Q9NX09 232 aa18.7■□□□□ 0.58
VARS2-206ENST00000473916 ARHGEF37A1IGU5 675 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 FAM72CH0Y354 149 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 GOLGA8MH3BSY2 632 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 TNFRSF10BO14763 440 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 PPARDQ03181 441 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 SKIDA1Q1XH10 827 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 FAM72AQ5TYM5 149 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 FAM72DQ6L9T8 149 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 RSPO2Q6UXX9 243 aaPredicted RBP18.69■□□□□ 0.58
VARS2-206ENST00000473916 TAS1R1Q7RTX1 841 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 TMCO2Q7Z6W1 182 aaPredicted RBP18.69■□□□□ 0.58
VARS2-206ENST00000473916 FAM72BQ86X60 149 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 TPX2Q9ULW0 747 aaKnown RBP18.69■□□□□ 0.58
VARS2-206ENST00000473916 SNX10Q9Y5X0 201 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 NR2E3Q9Y5X4 410 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 TCRBV7S3A2A0A539 114 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 SOAT2O75908 522 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 TGM2P21980 687 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 CTCFP49711 727 aaPredicted RBP18.69■□□□□ 0.58
VARS2-206ENST00000473916 CAV1Q03135 178 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 DDR2Q16832 855 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 CTXN3Q4LDR2 81 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 SPDYCQ5MJ68 293 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 HP1BP3Q5SSJ5 553 aaPredicted RBP18.69■□□□□ 0.58
VARS2-206ENST00000473916 SYCP2LQ5T4T6 812 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 NCBP2-AS2Q69YL0 99 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 C4orf50Q6ZRC1 276 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 TAC4Q86UU9 113 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 VSIG1Q86XK7 387 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 CCHCR1Q8TD31 782 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 GPR152Q8TDT2 470 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 ZNF333Q96JL9 665 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 USP29Q9HBJ7 922 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 COL4A6Q14031 1691 aa18.69■□□□□ 0.58
VARS2-206ENST00000473916 SMIM23A6NLE4 172 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 TRAPPC3O43617 180 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 CREB3O43889 395 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 BANF1O75531 89 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 GALTP07902 379 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 NUDT17P0C025 328 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 RBL1P28749 1068 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 ARPP19P56211 112 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 IFFO1Q0D2I5 559 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 MTM1Q13496 603 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 FASTKD3Q14CZ7 662 aaKnown RBP18.68■□□□□ 0.58
VARS2-206ENST00000473916 KYNUQ16719 465 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 KRT71Q3SY84 523 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 RTP2Q5QGT7 225 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 ZCCHC9Q8N567 271 aaKnown RBP18.68■□□□□ 0.58
VARS2-206ENST00000473916 ATAD1Q8NBU5 361 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 BBOF1Q8ND07 529 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 RNF139Q8WU17 664 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 CPT1BQ92523 772 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 PRCCQ92733 491 aaPredicted RBP18.68■□□□□ 0.58
VARS2-206ENST00000473916 C9orf72Q96LT7 481 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 ARHGEF4Q9NR80 690 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 TBX21Q9UL17 535 aa18.68■□□□□ 0.58
VARS2-206ENST00000473916 ALDH2P05091 517 aa18.67■□□□□ 0.58
VARS2-206ENST00000473916 MYZAPP0CAP1 466 aa18.67■□□□□ 0.58
VARS2-206ENST00000473916 FUT10Q6P4F1 479 aa18.67■□□□□ 0.58
VARS2-206ENST00000473916 EPS8L3Q8TE67 593 aaKnown RBP18.67■□□□□ 0.58
VARS2-206ENST00000473916 ATP6V1G3Q96LB4 118 aa18.67■□□□□ 0.58
VARS2-206ENST00000473916 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.67■□□□□ 0.58
VARS2-206ENST00000473916 NINJ2Q9NZG7 142 aa18.67■□□□□ 0.58
VARS2-206ENST00000473916 NUDT5Q9UKK9 219 aa18.67■□□□□ 0.58
VARS2-206ENST00000473916 FARP1Q9Y4F1 1045 aaPredicted RBP18.67■□□□□ 0.58
VARS2-206ENST00000473916 PLXNA3P51805 1871 aa18.67■□□□□ 0.58
VARS2-206ENST00000473916 ZNF487B1APH4 448 aa18.67■□□□□ 0.58
VARS2-206ENST00000473916 SYN3O14994 580 aa18.67■□□□□ 0.58
VARS2-206ENST00000473916 KCNN4O15554 427 aa18.67■□□□□ 0.58
VARS2-206ENST00000473916 FGFR3P22607 806 aa18.67■□□□□ 0.58
VARS2-206ENST00000473916 ADRA1BP35368 520 aa18.67■□□□□ 0.58
VARS2-206ENST00000473916 MRPL58Q14197 206 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms