RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 KRT12Q99456 494 aa15.41■□□□□ 0.06
LMNA-213ENST00000473598 CNPY3Q9BT09 278 aa15.41■□□□□ 0.06
LMNA-213ENST00000473598 ULBP1Q9BZM6 244 aa15.41■□□□□ 0.06
LMNA-213ENST00000473598 ASNSD1Q9NWL6 643 aa15.41■□□□□ 0.06
LMNA-213ENST00000473598 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.41■□□□□ 0.06
LMNA-213ENST00000473598 CDY1Q9Y6F8 540 aa15.41■□□□□ 0.06
LMNA-213ENST00000473598 ZNF638Q14966 1978 aaKnown RBP15.4■□□□□ 0.06
LMNA-213ENST00000473598 DPYSL4O14531 572 aa15.4■□□□□ 0.06
LMNA-213ENST00000473598 GLI1P08151 1106 aa15.4■□□□□ 0.06
LMNA-213ENST00000473598 IMPDH2P12268 514 aa15.4■□□□□ 0.06
LMNA-213ENST00000473598 MAGEA11P43364 429 aa15.4■□□□□ 0.06
LMNA-213ENST00000473598 DAOAP59103 153 aa15.4■□□□□ 0.06
LMNA-213ENST00000473598 DSG1Q02413 1049 aa15.4■□□□□ 0.06
LMNA-213ENST00000473598 E2F5Q15329 346 aa15.4■□□□□ 0.06
LMNA-213ENST00000473598 RAB30Q15771 203 aa15.4■□□□□ 0.06
LMNA-213ENST00000473598 CCDC14Q49A88 953 aa15.4■□□□□ 0.06
LMNA-213ENST00000473598 C1QTNF12Q5T7M4 302 aa15.4■□□□□ 0.06
LMNA-213ENST00000473598 PPP2R2DQ66LE6 453 aa15.4■□□□□ 0.06
LMNA-213ENST00000473598 CWF19L1Q69YN2 538 aaKnown RBP15.4■□□□□ 0.06
LMNA-213ENST00000473598 BZW1Q7L1Q6 419 aaKnown RBP15.4■□□□□ 0.06
LMNA-213ENST00000473598 SPPL2BQ8TCT7 592 aa15.4■□□□□ 0.06
LMNA-213ENST00000473598 NDRG1Q92597 394 aaKnown RBP15.4■□□□□ 0.06
LMNA-213ENST00000473598 RABEP2Q9H5N1 569 aa15.4■□□□□ 0.06
LMNA-213ENST00000473598 GDF3Q9NR23 364 aa15.4■□□□□ 0.06
LMNA-213ENST00000473598 TTC7AQ9ULT0 858 aaPredicted RBP15.4■□□□□ 0.06
LMNA-213ENST00000473598 REV3LO60673 3130 aa15.4■□□□□ 0.06
LMNA-213ENST00000473598 MTMR11A4FU01 709 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 HSF2BPO75031 334 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 LRCH4O75427 683 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 TCF4P15884 667 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 SDC4P31431 198 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 LSP1P33241 339 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 GLUD2P49448 558 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 SLC30A9Q6PML9 568 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 RNF19BQ6ZMZ0 732 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 SCN4BQ8IWT1 228 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 SCML4Q8N228 414 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 ARFGAP1Q8N6T3 406 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 ATAD1Q8NBU5 361 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 C2orf15Q8WU43 125 aaKnown RBP15.39■□□□□ 0.05
LMNA-213ENST00000473598 C8orf48Q96LL4 319 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 CFAP57Q96MR6 1250 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 FAM161BQ96MY7 647 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 C17orf80Q9BSJ5 609 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 TTYH1Q9H313 450 aaPredicted RBP15.39■□□□□ 0.05
LMNA-213ENST00000473598 SLC28A3Q9HAS3 691 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 USP3Q9Y6I4 520 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 C2CD2LO14523 706 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 TNFRSF10BO14763 440 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 SART1O43290 800 aaKnown RBP15.39■□□□□ 0.05
LMNA-213ENST00000473598 RNF8O76064 485 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 VNN2O95498 520 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 FAM107AO95990 144 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 ZBED1O96006 694 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 RPSAP08865 295 aaKnown RBP15.39■□□□□ 0.05
LMNA-213ENST00000473598 USP17L7P0C7H9 530 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 YWHAZP63104 245 aaKnown RBP15.39■□□□□ 0.05
LMNA-213ENST00000473598 ZNF211Q13398 564 aaPredicted RBP15.39■□□□□ 0.05
LMNA-213ENST00000473598 LACTB2Q53H82 288 aaPredicted RBP15.39■□□□□ 0.05
LMNA-213ENST00000473598 LRRC38Q5VT99 294 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 PM20D1Q6GTS8 502 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 RBM12BQ8IXT5 1001 aaKnown RBP15.39■□□□□ 0.05
LMNA-213ENST00000473598 IFT20Q8IY31 132 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 FAM149B1Q96BN6 582 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 GDAP1L1Q96MZ0 367 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 STK39Q9UEW8 545 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 PLXNA3P51805 1871 aa15.39■□□□□ 0.05
LMNA-213ENST00000473598 COL4A4P53420 1690 aaPredicted RBP15.38■□□□□ 0.05
LMNA-213ENST00000473598 WDR27A2RRH5 827 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 ADAM12O43184 909 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 DAB1O75553 588 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 DNAJC8O75937 253 aaPredicted RBP15.38■□□□□ 0.05
LMNA-213ENST00000473598 FGF18O76093 207 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 HEXIM1O94992 359 aaKnown RBP15.38■□□□□ 0.05
LMNA-213ENST00000473598 PYGMP11217 842 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 RPL17P18621 184 aaKnown RBP15.38■□□□□ 0.05
LMNA-213ENST00000473598 OR1D2P34982 312 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 PTPN9P43378 593 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 ROR1Q01973 937 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 SLC25A11Q02978 314 aaKnown RBP15.38■□□□□ 0.05
LMNA-213ENST00000473598 KRT17Q04695 432 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 C15orf59Q2T9L4 293 aaPredicted RBP15.38■□□□□ 0.05
LMNA-213ENST00000473598 EMBQ6PCB8 327 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 Q7L0L9 218 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 APLFQ8IW19 511 aaPredicted RBP15.38■□□□□ 0.05
LMNA-213ENST00000473598 KATNAL2Q8IYT4 538 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 VPS52Q8N1B4 723 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 IRGQQ8WZA9 623 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 CLSTN3Q9BQT9 956 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 C11orf84Q9BUA3 381 aaPredicted RBP15.38■□□□□ 0.05
LMNA-213ENST00000473598 DDX23Q9BUQ8 820 aaKnown RBP15.38■□□□□ 0.05
LMNA-213ENST00000473598 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.38■□□□□ 0.053e-8■■□□□ 12.4
LMNA-213ENST00000473598 ENO4A6NNW6 628 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 YJEFN3A6XGL0 299 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 E7ENQ6 273 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 CCDC188H7C350 402 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 RAD51CO43502 376 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 URODP06132 367 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 DESP17661 470 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 PCK1P35558 622 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms