RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 GNA15P30679 374 aa23.58■■□□□ 1.37
PTP4A1-203ENST00000473334 APBA1Q02410 837 aa23.58■■□□□ 1.37
PTP4A1-203ENST00000473334 ARHGAP44Q17R89 818 aa23.58■■□□□ 1.37
PTP4A1-203ENST00000473334 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.58■■□□□ 1.37
PTP4A1-203ENST00000473334 FMNL3Q8IVF7 1028 aa23.58■■□□□ 1.37
PTP4A1-203ENST00000473334 ALLCQ8N6M5 410 aa23.58■■□□□ 1.37
PTP4A1-203ENST00000473334 IL17RCQ8NAC3 791 aa23.58■■□□□ 1.37
PTP4A1-203ENST00000473334 TXNDC5Q8NBS9 432 aaKnown RBP23.58■■□□□ 1.37
PTP4A1-203ENST00000473334 TSTD1Q8NFU3 115 aa23.58■■□□□ 1.37
PTP4A1-203ENST00000473334 TUBGCP2Q9BSJ2 902 aa23.58■■□□□ 1.37
PTP4A1-203ENST00000473334 NDST4Q9H3R1 872 aa23.58■■□□□ 1.37
PTP4A1-203ENST00000473334 EBF1Q9UH73 591 aa23.58■■□□□ 1.37
PTP4A1-203ENST00000473334 AGO1Q9UL18 857 aaKnown RBP23.58■■□□□ 1.37
PTP4A1-203ENST00000473334 HBS1LQ9Y450 684 aaKnown RBP23.58■■□□□ 1.37
PTP4A1-203ENST00000473334 TRIM24O15164 1050 aa23.57■■□□□ 1.36
PTP4A1-203ENST00000473334 THAP12O43422 761 aa23.57■■□□□ 1.36
PTP4A1-203ENST00000473334 RPP40O75818 363 aaKnown RBP23.57■■□□□ 1.36
PTP4A1-203ENST00000473334 KLF8O95600 359 aaPredicted RBP23.57■■□□□ 1.36
PTP4A1-203ENST00000473334 PRKCSHP14314 528 aaPredicted RBP23.57■■□□□ 1.36
PTP4A1-203ENST00000473334 GPD2P43304 727 aa23.57■■□□□ 1.36
PTP4A1-203ENST00000473334 TRIP4Q15650 581 aaPredicted RBP23.57■■□□□ 1.36
PTP4A1-203ENST00000473334 CRY1Q16526 586 aa23.57■■□□□ 1.36
PTP4A1-203ENST00000473334 VWA3BQ502W6 1294 aa23.57■■□□□ 1.36
PTP4A1-203ENST00000473334 HSP90AA4PQ58FG1 418 aa23.57■■□□□ 1.36
PTP4A1-203ENST00000473334 C10orf76Q5T2E6 689 aa23.57■■□□□ 1.36
PTP4A1-203ENST00000473334 EMC10Q5UCC4 262 aa23.57■■□□□ 1.36
PTP4A1-203ENST00000473334 DENND1CQ8IV53 801 aa23.57■■□□□ 1.36
PTP4A1-203ENST00000473334 GPR161Q8N6U8 529 aaKnown RBP23.57■■□□□ 1.36
PTP4A1-203ENST00000473334 KCNV2Q8TDN2 545 aa23.57■■□□□ 1.36
PTP4A1-203ENST00000473334 ZNF606Q8WXB4 792 aa23.57■■□□□ 1.36
PTP4A1-203ENST00000473334 BECN2A8MW95 431 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 LTFP02788 710 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 RETP07949 1114 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 USP8P40818 1118 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 ACADSBP45954 432 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 RPL34P49207 117 aaKnown RBP23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 DGKEP52429 567 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 MIIPQ5JXC2 388 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 EOGTQ5NDL2 527 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 SMYD5Q6GMV2 418 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 MSANTD2Q6P1R3 559 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 DENND1BQ6P3S1 775 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 RBM43Q6ZSC3 357 aaKnown RBP23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 CPXM2Q8N436 756 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 CLEC4CQ8WTT0 213 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 SHC3Q92529 594 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 GOLGA1Q92805 767 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 BHMTQ93088 406 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 SIX2Q9NPC8 291 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 PLK2Q9NYY3 685 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 SFMBT1Q9UHJ3 866 aa23.56■■□□□ 1.36
PTP4A1-203ENST00000473334 KCNJ18B7U540 433 aa23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 SGK1O00141 431 aa23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 PENKP01210 267 aaPredicted RBP23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 HARS2P49590 506 aaKnown RBP23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 DGKGP49619 791 aa23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 KCNJ12Q14500 433 aa23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 TMEM92Q6UXU6 159 aa23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 TRMT11Q7Z4G4 463 aaKnown RBP23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 FAM217AQ8IXS0 508 aa23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 FAM160A2Q8N612 972 aaPredicted RBP23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 ZNF513Q8N8E2 541 aaPredicted RBP23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 STK32AQ8WU08 396 aa23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 MIS12Q9H081 205 aa23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 ACP6Q9NPH0 428 aa23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 ST7Q9NRC1 585 aa23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 SAMSN1Q9NSI8 373 aaKnown RBP23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 STARD13Q9Y3M8 1113 aa23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 DMXL1Q9Y485 3027 aa23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 SPAG17Q6Q759 2223 aa23.55■■□□□ 1.36
PTP4A1-203ENST00000473334 SART1O43290 800 aaKnown RBP23.54■■□□□ 1.36
PTP4A1-203ENST00000473334 FYB2Q5VWT5 728 aa23.54■■□□□ 1.36
PTP4A1-203ENST00000473334 ANO7Q6IWH7 933 aa23.54■■□□□ 1.36
PTP4A1-203ENST00000473334 TOGARAM2Q6ZUX3 1019 aa23.54■■□□□ 1.36
PTP4A1-203ENST00000473334 CACNA2D4Q7Z3S7 1137 aa23.54■■□□□ 1.36
PTP4A1-203ENST00000473334 RASSF3Q86WH2 238 aa23.54■■□□□ 1.36
PTP4A1-203ENST00000473334 P2RY11Q96G91 374 aa23.54■■□□□ 1.36
PTP4A1-203ENST00000473334 ZDHHC4Q9NPG8 344 aa23.54■■□□□ 1.36
PTP4A1-203ENST00000473334 FBXO10Q9UK96 956 aa23.54■■□□□ 1.36
PTP4A1-203ENST00000473334 AJAP1Q9UKB5 411 aaPredicted RBP23.54■■□□□ 1.36
PTP4A1-203ENST00000473334 NFE2L3Q9Y4A8 694 aa23.54■■□□□ 1.36
PTP4A1-203ENST00000473334 MYO18AQ92614 2054 aaKnown RBP23.54■■□□□ 1.36
PTP4A1-203ENST00000473334 PES1O00541 588 aaKnown RBP23.53■■□□□ 1.36
PTP4A1-203ENST00000473334 MSI1O43347 362 aaKnown RBP23.53■■□□□ 1.36
PTP4A1-203ENST00000473334 ADAM23O75077 832 aa23.53■■□□□ 1.36
PTP4A1-203ENST00000473334 ALDH1A2O94788 518 aa23.53■■□□□ 1.36
PTP4A1-203ENST00000473334 LATS1O95835 1130 aa23.53■■□□□ 1.36
PTP4A1-203ENST00000473334 CYBBP04839 570 aa23.53■■□□□ 1.36
PTP4A1-203ENST00000473334 CISD3P0C7P0 127 aa23.53■■□□□ 1.36
PTP4A1-203ENST00000473334 HNRNPLP14866 589 aaKnown RBP eCLIP23.53■■□□□ 1.36
PTP4A1-203ENST00000473334 EEF1GP26641 437 aaKnown RBP23.53■■□□□ 1.36
PTP4A1-203ENST00000473334 TCP11X2Q5H9J9 407 aa23.53■■□□□ 1.36
PTP4A1-203ENST00000473334 ENOX1Q8TC92 643 aaKnown RBP23.53■■□□□ 1.36
PTP4A1-203ENST00000473334 SLC4A5Q9BY07 1137 aa23.53■■□□□ 1.36
PTP4A1-203ENST00000473334 POLMQ9NP87 494 aaPredicted RBP23.53■■□□□ 1.36
PTP4A1-203ENST00000473334 DNAJC12Q9UKB3 198 aa23.53■■□□□ 1.36
PTP4A1-203ENST00000473334 LRP3O75074 770 aa23.52■■□□□ 1.36
PTP4A1-203ENST00000473334 KBTBD6Q86V97 674 aa23.52■■□□□ 1.36
PTP4A1-203ENST00000473334 SCUBE3Q8IX30 993 aa23.52■■□□□ 1.36
PTP4A1-203ENST00000473334 MDGA1Q8NFP4 955 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms