RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 COG5Q9UP83 839 aa10.98□□□□□ -0.65
UBE2F-220ENST00000472479 ZKSCAN5Q9Y2L8 839 aa10.98□□□□□ -0.65
UBE2F-220ENST00000472479 SH3BP1Q9Y3L3 701 aa10.98□□□□□ -0.65
UBE2F-220ENST00000472479 PRRC2BQ5JSZ5 2229 aaKnown RBP10.98□□□□□ -0.65
UBE2F-220ENST00000472479 CHD9Q3L8U1 2897 aa10.98□□□□□ -0.65
UBE2F-220ENST00000472479 A0A0U1RQJ8 604 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 BTNL10A8MVZ5 291 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 PRPSAP2O60256 369 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 PROSCO94903 275 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 MOCS2O96007 188 aaPredicted RBP10.97□□□□□ -0.65
UBE2F-220ENST00000472479 APOEP02649 317 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 ZDHHC11BP0C7U3 371 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 SP100P23497 879 aaPredicted RBP10.97□□□□□ -0.65
UBE2F-220ENST00000472479 RDXP35241 583 aaKnown RBP10.97□□□□□ -0.65
UBE2F-220ENST00000472479 CCR2P41597 374 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 HARS2P49590 506 aaKnown RBP10.97□□□□□ -0.65
UBE2F-220ENST00000472479 TUBP50607 506 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 ACAP1Q15027 740 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 SLC5A9Q2M3M2 681 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 ZNF569Q5MCW4 686 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 PPP1R15BQ5SWA1 713 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 STXBP5Q5T5C0 1151 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 SNX30Q5VWJ9 437 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 BHLHA9Q7RTU4 235 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 TMEM150AQ86TG1 271 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 TAC4Q86UU9 113 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 ATRIPQ8WXE1 791 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 KHSRPQ92945 711 aaKnown RBP eCLIP10.97□□□□□ -0.652e-6■■■■□ 20.6
UBE2F-220ENST00000472479 MSLNLQ96KJ4 702 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 SLC46A2Q9BY10 475 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 WDCPQ9H6R7 721 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 GKN1Q9NS71 199 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 PCSK1NQ9UHG2 260 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 AMFRQ9UKV5 643 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 USP15Q9Y4E8 981 aaPredicted RBP10.97□□□□□ -0.65
UBE2F-220ENST00000472479 CPQQ9Y646 472 aa10.97□□□□□ -0.65
UBE2F-220ENST00000472479 TCRBV5S1A1TA0A578 114 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 MSI1O43347 362 aaKnown RBP10.96□□□□□ -0.65
UBE2F-220ENST00000472479 TADA3O75528 432 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 PALMO75781 387 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 FYNP06241 537 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 SLC2A3P11169 496 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 PFKLP17858 780 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 CCR1P32246 355 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 SLC1A1P43005 524 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 PTPN9P43378 593 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 DNA2P51530 1060 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 SMAD4Q13485 552 aaKnown RBP10.96□□□□□ -0.65
UBE2F-220ENST00000472479 PRSS36Q5K4E3 855 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 STRADAQ7RTN6 431 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 OTOP3Q7RTS5 596 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 PEX26Q7Z412 305 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 FAM131BQ86XD5 332 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 DDX42Q86XP3 938 aaKnown RBP eCLIP10.96□□□□□ -0.65
UBE2F-220ENST00000472479 UNC45BQ8IWX7 931 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 REXO1L1PQ8IX06 675 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 YAF2Q8IY57 180 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 CMTM8Q8IZV2 173 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 C17orf53Q8N3J3 647 aaPredicted RBP10.96□□□□□ -0.65
UBE2F-220ENST00000472479 ATP6V0D2Q8N8Y2 350 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 TPCN2Q8NHX9 752 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 ZSCAN18Q8TBC5 510 aaPredicted RBP10.96□□□□□ -0.65
UBE2F-220ENST00000472479 FNIP1Q8TF40 1166 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 FGF13Q92913 245 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 NPY6RQ99463 290 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 RNF38Q9H0F5 515 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 SMG9Q9H0W8 520 aaKnown RBP10.96□□□□□ -0.65
UBE2F-220ENST00000472479 SMOC2Q9H3U7 446 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 ZWILCHQ9H900 591 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 TMEM51Q9NW97 253 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.96□□□□□ -0.65
UBE2F-220ENST00000472479 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.96□□□□□ -0.65
UBE2F-220ENST00000472479 HYOU1Q9Y4L1 999 aa10.96□□□□□ -0.65
UBE2F-220ENST00000472479 SOBPA7XYQ1 873 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 BUB1BO60566 1050 aaPredicted RBP10.95□□□□□ -0.66
UBE2F-220ENST00000472479 MTA2O94776 668 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 OAS1P00973 400 aaKnown RBP10.95□□□□□ -0.66
UBE2F-220ENST00000472479 GNG11P61952 73 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 OGDHQ02218 1023 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 TRIP4Q15650 581 aaPredicted RBP10.95□□□□□ -0.66
UBE2F-220ENST00000472479 ZC3H12AQ5D1E8 599 aaKnown RBP10.95□□□□□ -0.66
UBE2F-220ENST00000472479 SH3PXD2AQ5TCZ1 1133 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 MSANTD2Q6P1R3 559 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 ZNF662Q6ZS27 426 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 ARID3BQ8IVW6 561 aaPredicted RBP10.95□□□□□ -0.66
UBE2F-220ENST00000472479 ZNF276Q8N554 614 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 SMRP1Q8NCR6 262 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 TRIM58Q8NG06 486 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 RPGRIP1Q96KN7 1286 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 DCLK3Q9C098 648 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 SIK2Q9H0K1 926 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 POMKQ9H5K3 350 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 TDP1Q9NUW8 608 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 GDE1Q9NZC3 331 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 CFAP97Q9P2B7 532 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 CDH7Q9ULB5 785 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 HBS1LQ9Y450 684 aaKnown RBP10.95□□□□□ -0.66
UBE2F-220ENST00000472479 NR2E1Q9Y466 385 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 ALG6Q9Y672 507 aa10.95□□□□□ -0.66
UBE2F-220ENST00000472479 PTPRDP23468 1912 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms