RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 PRRT4C9JH25 899 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 E7ENQ6 273 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 RNF225M0QZC1 329 aaPredicted RBP9.45□□□□□ -0.9
USF1-204ENST00000472217 SLC30A4O14863 429 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 GABBR2O75899 941 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 ALDH1A2O94788 518 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 RHOBTB1O94844 696 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 GNA14O95837 355 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 PENKP01210 267 aaPredicted RBP9.45□□□□□ -0.9
USF1-204ENST00000472217 CALCAP01258 141 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 AFPP02771 609 aaKnown RBP9.45□□□□□ -0.9
USF1-204ENST00000472217 ZNF806P0C7X5 589 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 BCKDHBP21953 392 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 BRD2P25440 801 aaKnown RBP9.45□□□□□ -0.9
USF1-204ENST00000472217 CORO1AP31146 461 aaKnown RBP9.45□□□□□ -0.9
USF1-204ENST00000472217 WASP42768 502 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 DGKGP49619 791 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 GCNT1Q02742 428 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 CETN1Q12798 172 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 AASDHQ4L235 1098 aaPredicted RBP9.45□□□□□ -0.9
USF1-204ENST00000472217 PLA2G2CQ5R387 149 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 FYB2Q5VWT5 728 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 EGFLAMQ63HQ2 1017 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 PMS2CLQ68D20 193 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 LCLAT1Q6UWP7 414 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 TRMT11Q7Z4G4 463 aaKnown RBP9.45□□□□□ -0.9
USF1-204ENST00000472217 DENND1CQ8IV53 801 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 SIX6OS1Q8N1H7 587 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 C12orf50Q8NA57 414 aaPredicted RBP9.45□□□□□ -0.9
USF1-204ENST00000472217 RBBP8NLQ8NC74 664 aaPredicted RBP9.45□□□□□ -0.9
USF1-204ENST00000472217 EHBP1Q8NDI1 1231 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 KCNV2Q8TDN2 545 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 HMGB4Q8WW32 186 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 KCTD13Q8WZ19 329 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 EDEM1Q92611 657 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 PLD4Q96BZ4 506 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 KREMEN1Q96MU8 473 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 IPO9Q96P70 1041 aaKnown RBP9.45□□□□□ -0.9
USF1-204ENST00000472217 MED15Q96RN5 788 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 ACOX2Q99424 681 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 RTKNQ9BST9 563 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 DCLK3Q9C098 648 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 INTS2Q9H0H0 1204 aaKnown RBP9.45□□□□□ -0.9
USF1-204ENST00000472217 RXFP3Q9NSD7 469 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 OLA1Q9NTK5 396 aaKnown RBP9.45□□□□□ -0.9
USF1-204ENST00000472217 CHMP5Q9NZZ3 219 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 KIAA1468Q9P260 1216 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 BCCIPQ9P287 314 aaKnown RBP eCLIP9.45□□□□□ -0.9
USF1-204ENST00000472217 AGO1Q9UL18 857 aaKnown RBP9.45□□□□□ -0.9
USF1-204ENST00000472217 STRIP2Q9ULQ0 834 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.45□□□□□ -0.9
USF1-204ENST00000472217 ZNF510Q9Y2H8 683 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 STARD13Q9Y3M8 1113 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.45□□□□□ -0.9
USF1-204ENST00000472217 WDR87Q6ZQQ6 2873 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 DMXL1Q9Y485 3027 aa9.45□□□□□ -0.9
USF1-204ENST00000472217 RALGAPA1Q6GYQ0 2036 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 CEP250Q9BV73 2442 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 CACNA1AO00555 2505 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 A0A1W2PQF6 199 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 BCLAF3A2AJT9 711 aaKnown RBP9.44□□□□□ -0.9
USF1-204ENST00000472217 M0QYV0 167 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 PIK3R2O00459 728 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 CISD3P0C7P0 127 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 LCP1P13796 627 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 HOXB2P14652 356 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 GABRG2P18507 467 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 NTSR1P30989 418 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 CHKAP35790 457 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 P2RY2P41231 377 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 RGS7P49802 495 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 ZNF132P52740 706 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 DAOAP59103 153 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 CREB5Q02930 508 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 STILQ15468 1287 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 CNGA2Q16280 664 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 BSPRYQ5W0U4 402 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 TCEAL6Q6IPX3 200 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 PMF1Q6P1K2 205 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 C11orf74Q86VG3 221 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 FMNL3Q8IVF7 1028 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 CHPFQ8IZ52 775 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 SCML4Q8N228 414 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 PGBD3Q8N328 593 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 CPXM2Q8N436 756 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 FRMD1Q8N878 549 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 RNF139Q8WU17 664 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 SLC35F5Q8WV83 523 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 RLN3Q8WXF3 142 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 TCEAL3Q969E4 200 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 CNGB3Q9NQW8 809 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 VPS45Q9NRW7 570 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 ABCC13Q9NSE7 274 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 RWDD2AQ9UIY3 292 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 FBXO10Q9UK96 956 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 PLXND1Q9Y4D7 1925 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 SPAG17Q6Q759 2223 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 DCHS1Q96JQ0 3298 aa9.44□□□□□ -0.9
USF1-204ENST00000472217 TNRC6BQ9UPQ9 1833 aaKnown RBP9.43□□□□□ -0.9
USF1-204ENST00000472217 MSI1O43347 362 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms