RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 SH3RF1Q7Z6J0 888 aa10.28□□□□□ -0.76
NUP50-214ENST00000469163 PSD4Q8NDX1 1056 aa10.28□□□□□ -0.76
NUP50-214ENST00000469163 INPP5DQ92835 1189 aa10.28□□□□□ -0.76
NUP50-214ENST00000469163 GPRASP2Q96D09 838 aa10.28□□□□□ -0.76
NUP50-214ENST00000469163 PGBD4Q96DM1 585 aa10.28□□□□□ -0.76
NUP50-214ENST00000469163 VPS35Q96QK1 796 aa10.28□□□□□ -0.76
NUP50-214ENST00000469163 IFIH1Q9BYX4 1025 aaKnown RBP10.28□□□□□ -0.76
NUP50-214ENST00000469163 IMPG2Q9BZV3 1241 aa10.28□□□□□ -0.76
NUP50-214ENST00000469163 AGPAT3Q9NRZ7 376 aa10.28□□□□□ -0.76
NUP50-214ENST00000469163 NDE1Q9NXR1 346 aa10.28□□□□□ -0.76
NUP50-214ENST00000469163 STX18Q9P2W9 335 aaKnown RBP10.28□□□□□ -0.76
NUP50-214ENST00000469163 KLHL3Q9UH77 587 aa10.28□□□□□ -0.76
NUP50-214ENST00000469163 PVALEFA0A1B0GWK0 134 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 TBX3O15119 743 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 IL32P24001 234 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 SLC5A2P31639 672 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 TNFSF9P41273 254 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 MAN2A1Q16706 1144 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 TMEM119Q4V9L6 283 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 C6orf118Q5T5N4 469 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 METTL7BQ6UX53 244 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 ZNF720Q7Z2F6 126 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 SLC30A5Q8TAD4 765 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 HELQQ8TDG4 1101 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 MS4A4AQ96JQ5 239 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 UROC1Q96N76 676 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 ISCUQ9H1K1 167 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 POLMQ9NP87 494 aaPredicted RBP10.27□□□□□ -0.77
NUP50-214ENST00000469163 DMTF1Q9Y222 760 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 ATP11BQ9Y2G3 1177 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 RWDD3Q9Y3V2 267 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 NUMBLQ9Y6R0 609 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 MYH4Q9Y623 1939 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 B4GALT4O60513 344 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 MTA2O94776 668 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 PLS3P13797 630 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 MAGEA1P43355 309 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 NT5C2P49902 561 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 GJA9P57773 515 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 PDAP1Q13442 181 aaKnown RBP10.27□□□□□ -0.77
NUP50-214ENST00000469163 SNRNP35Q16560 246 aaKnown RBP10.27□□□□□ -0.77
NUP50-214ENST00000469163 ALKBH2Q6NS38 261 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 ACAD11Q709F0 780 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 IFNL1Q8IU54 200 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 ELMOD2Q8IZ81 293 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 XXYLT1Q8NBI6 393 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 FLCNQ8NFG4 579 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 ACTRT2Q8TDY3 377 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 TLCD1Q96CP7 247 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 C1orf74Q96LT6 269 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 CCDC77Q9BR77 488 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 NHEJ1Q9H9Q4 299 aaPredicted RBP10.27□□□□□ -0.77
NUP50-214ENST00000469163 RBAKQ9NYW8 714 aaPredicted RBP10.27□□□□□ -0.77
NUP50-214ENST00000469163 THEGQ9P2T0 379 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 ERVK-11Q9UQG0 969 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 PCDHGA11Q9Y5H2 935 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 CDH23Q9H251 3354 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 DAPK3O43293 454 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 PQBP1O60828 265 aaKnown RBP10.27□□□□□ -0.77
NUP50-214ENST00000469163 DGAT1O75907 488 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 ITGBL1O95965 494 aaPredicted RBP10.27□□□□□ -0.77
NUP50-214ENST00000469163 PRLP01236 227 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 LGALS2P05162 132 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 FDX1P10109 184 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 CIITAP33076 1130 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 THPOP40225 353 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 NOVP48745 357 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 VCPP55072 806 aaKnown RBP10.27□□□□□ -0.77
NUP50-214ENST00000469163 MGAT5Q09328 741 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 CDC16Q13042 620 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 ASIC2Q16515 512 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 EDRF1Q3B7T1 1238 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 SPARTQ8N0X7 666 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 ZNF784Q8NCA9 323 aaPredicted RBP10.27□□□□□ -0.77
NUP50-214ENST00000469163 HERVK_113Q902F9 699 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 OMA1Q96E52 524 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 TGS1Q96RS0 853 aaKnown RBP10.27□□□□□ -0.77
NUP50-214ENST00000469163 CTRCQ99895 268 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 WNT8AQ9H1J5 351 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 ERAP1Q9NZ08 941 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 FLRT1Q9NZU1 646 aa10.27□□□□□ -0.77
NUP50-214ENST00000469163 AGO2Q9UKV8 859 aaKnown RBP10.27□□□□□ -0.77
NUP50-214ENST00000469163 GSTTP1A0A1W2PQM5 241 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 TAF4O00268 1085 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 FTCDO95954 541 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 OAS1P00973 400 aaKnown RBP10.26□□□□□ -0.77
NUP50-214ENST00000469163 PRKCBP05771 671 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 CPA3P15088 417 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 CLK1P49759 484 aaKnown RBP10.26□□□□□ -0.77
NUP50-214ENST00000469163 PPP2R2BQ00005 443 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 CUL1Q13616 776 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 WDR44Q5JSH3 913 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 LDLRAD1Q5T700 205 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 NXNQ6DKJ4 435 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 LVRNQ6Q4G3 990 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 RASAL3Q86YV0 1011 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 IRF2BP1Q8IU81 584 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 MMAAQ8IVH4 418 aaKnown RBP10.26□□□□□ -0.77
NUP50-214ENST00000469163 CFAP61Q8NHU2 1237 aa10.26□□□□□ -0.77
NUP50-214ENST00000469163 NEUROG2Q9H2A3 272 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms