RNA–Protein interactions for RNA: ENST00000468876.1

ARHGEF39-202, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-202ENST00000468876 SUZ12Q15022 739 aaKnown RBP12.37□□□□□ -0.43
ARHGEF39-202ENST00000468876 C1orf220Q5T0J3 134 aa12.37□□□□□ -0.43
ARHGEF39-202ENST00000468876 VSTM1Q6UX27 236 aa12.37□□□□□ -0.43
ARHGEF39-202ENST00000468876 FAM35AQ86V20 835 aa12.37□□□□□ -0.43
ARHGEF39-202ENST00000468876 SFTPA1Q8IWL2 248 aa12.37□□□□□ -0.43
ARHGEF39-202ENST00000468876 B3GALNT2Q8NCR0 500 aa12.37□□□□□ -0.43
ARHGEF39-202ENST00000468876 PARD3BQ8TEW8 1205 aa12.37□□□□□ -0.43
ARHGEF39-202ENST00000468876 OSCP1Q8WVF1 389 aa12.37□□□□□ -0.43
ARHGEF39-202ENST00000468876 IPO9Q96P70 1041 aaKnown RBP12.37□□□□□ -0.43
ARHGEF39-202ENST00000468876 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.37□□□□□ -0.43
ARHGEF39-202ENST00000468876 DMAC2Q9NW81 257 aa12.37□□□□□ -0.43
ARHGEF39-202ENST00000468876 SMPD4Q9NXE4 827 aa12.37□□□□□ -0.43
ARHGEF39-202ENST00000468876 ARHGAP26Q9UNA1 814 aa12.37□□□□□ -0.43
ARHGEF39-202ENST00000468876 BTBD3Q9Y2F9 522 aa12.37□□□□□ -0.43
ARHGEF39-202ENST00000468876 FNDC3AQ9Y2H6 1198 aaKnown RBP12.37□□□□□ -0.43
ARHGEF39-202ENST00000468876 NOTCH2Q04721 2471 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 DOPEY1Q5JWR5 2465 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 ZNF840PA6NDX5 716 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 A8MXQ7 604 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 TRIM66O15016 1216 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 OLFM2O95897 454 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 OAS1P00973 400 aaKnown RBP12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 ZNF883P0CG24 379 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 ANXA13P27216 316 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 NDUFA8P51970 172 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 UCNP55089 124 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 SNRPFP62306 86 aaKnown RBP12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 NOP14P78316 857 aaKnown RBP12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 CLDN10P78369 228 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 MESP2Q0VG99 397 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 TRPC3Q13507 836 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 SERINC3Q13530 473 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 NCOA4Q13772 614 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 MAPRE1Q15691 268 aaKnown RBP12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 WDR45BQ5MNZ6 344 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 ATL3Q6DD88 541 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 SPOPLQ6IQ16 392 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 PAQR9Q6ZVX9 377 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 IL17RCQ8NAC3 791 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 TTC9Q92623 222 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 C8orf48Q96LL4 319 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 ELOVL4Q9GZR5 314 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 RNF38Q9H0F5 515 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 LINC00597Q9H2U6 94 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 ZDHHC4Q9NPG8 344 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 KRT82Q9NSB4 513 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 CALCOCO1Q9P1Z2 691 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 CFAP45Q9UL16 551 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 CYP8B1Q9UNU6 501 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 CPQQ9Y646 472 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 ABCA12Q86UK0 2595 aa12.36□□□□□ -0.43
ARHGEF39-202ENST00000468876 LEFTY2O00292 366 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 TERTO14746 1132 aaKnown RBP12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 ZBTB24O43167 697 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 BRINP1O60477 761 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 PHACTR2O75167 634 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 C4BPAP04003 597 aaKnown RBP12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 CYP17A1P05093 508 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 TRIM49P0CI25 452 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 TRIM49CP0CI26 452 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 CCDC130P13994 396 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 HDCP19113 662 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 CMA1P23946 247 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 ASPAP45381 313 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 PGFP49763 221 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 TAF10Q12962 218 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 RTP5Q14D33 572 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 HLA-BQ31612 363 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 ATG14Q6ZNE5 492 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 SYAP1Q96A49 352 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 SPATA32Q96LK8 384 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 TWNKQ96RR1 684 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 KCNK16Q96T55 309 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 NRSN2Q9GZP1 204 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 MIR1-1HGQ9H1L0 117 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 VRTNQ9H8Y1 702 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 GDPD2Q9HCC8 539 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 TRPM5Q9NZQ8 1165 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 CGNQ9P2M7 1197 aaKnown RBP12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 SEPT3Q9UH03 358 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 CREBBPQ92793 2442 aa12.35□□□□□ -0.43
ARHGEF39-202ENST00000468876 ATMQ13315 3056 aa12.34□□□□□ -0.43
ARHGEF39-202ENST00000468876 MGAQ8IWI9 3026 aa12.34□□□□□ -0.43
ARHGEF39-202ENST00000468876 IGHV1OR15-9A0A0B4J2B8 117 aa12.34□□□□□ -0.43
ARHGEF39-202ENST00000468876 A0A1B0GTW7 788 aa12.34□□□□□ -0.43
ARHGEF39-202ENST00000468876 MEI4A8MW99 385 aa12.34□□□□□ -0.43
ARHGEF39-202ENST00000468876 BEST1O76090 585 aa12.34□□□□□ -0.43
ARHGEF39-202ENST00000468876 ABL1P00519 1130 aa12.34□□□□□ -0.43
ARHGEF39-202ENST00000468876 RPN1P04843 607 aaKnown RBP12.34□□□□□ -0.43
ARHGEF39-202ENST00000468876 CHRM1P11229 460 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF39-202ENST00000468876 TCF3P15923 654 aa12.34□□□□□ -0.43
ARHGEF39-202ENST00000468876 ATICP31939 592 aa12.34□□□□□ -0.43
ARHGEF39-202ENST00000468876 OPRD1P41143 372 aa12.34□□□□□ -0.43
ARHGEF39-202ENST00000468876 DPYDQ12882 1025 aa12.34□□□□□ -0.43
ARHGEF39-202ENST00000468876 TARDBPQ13148 414 aaKnown RBP eCLIP12.34□□□□□ -0.43
ARHGEF39-202ENST00000468876 PTPRNQ16849 979 aa12.34□□□□□ -0.43
ARHGEF39-202ENST00000468876 ZACNQ401N2 412 aa12.34□□□□□ -0.43
ARHGEF39-202ENST00000468876 HSF5Q4G112 596 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF39-202ENST00000468876 ZNF667Q5HYK9 610 aa12.34□□□□□ -0.43
ARHGEF39-202ENST00000468876 EMC10Q5UCC4 262 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms