RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 WDR27A2RRH5 827 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 APOC4-APOC2K7ER74 178 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 IGLV3-25P01717 112 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 APOC2P02655 101 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 FAM153BP0C7A2 387 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 PECAM1P16284 738 aaPredicted RBP9.92□□□□□ -0.82
SRPRB-202ENST00000466636 RPL21P46778 160 aaKnown RBP9.92□□□□□ -0.82
SRPRB-202ENST00000466636 CXCR3P49682 368 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 PGFP49763 221 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 AIF1P55008 147 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 VCPP55072 806 aaKnown RBP9.92□□□□□ -0.82
SRPRB-202ENST00000466636 YWHAGP61981 247 aaKnown RBP eCLIP9.92□□□□□ -0.82
SRPRB-202ENST00000466636 USP46P62068 366 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 DYNLT1P63172 113 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 HTRA4P83105 476 aaPredicted RBP9.92□□□□□ -0.82
SRPRB-202ENST00000466636 OTUD4Q01804 1114 aaKnown RBP9.92□□□□□ -0.82
SRPRB-202ENST00000466636 ROR1Q01973 937 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 KRT17Q04695 432 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 SCAPQ12770 1279 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 NME3Q13232 169 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 PPIGQ13427 754 aaKnown RBP eCLIP9.92□□□□□ -0.82
SRPRB-202ENST00000466636 EIF4EBP2Q13542 120 aaPredicted RBP9.92□□□□□ -0.82
SRPRB-202ENST00000466636 TFDP2Q14188 446 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 CASP8Q14790 479 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 PSMD5Q16401 504 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 FAM153CQ494X1 144 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 ANKRD20A8PQ5CZ79 823 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 SLC9A4Q6AI14 798 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 ZNF365Q70YC5 407 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 SND1Q7KZF4 910 aaKnown RBP eCLIP9.92□□□□□ -0.825e-8■■■■□ 26.2
SRPRB-202ENST00000466636 OTOP2Q7RTS6 562 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 HDXQ7Z353 690 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 TAC4Q86UU9 113 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 NUP93Q8N1F7 819 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 TTC13Q8NBP0 860 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 ADAM32Q8TC27 787 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 ACTL9Q8TC94 416 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 DQX1Q8TE96 717 aaKnown RBP9.92□□□□□ -0.82
SRPRB-202ENST00000466636 RIN2Q8WYP3 895 aaPredicted RBP9.92□□□□□ -0.82
SRPRB-202ENST00000466636 BADQ92934 168 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 NTAN1Q96AB6 310 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 MAGEB5Q9BZ81 275 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 TRIM31Q9BZY9 425 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 DHX35Q9H5Z1 703 aaKnown RBP9.92□□□□□ -0.82
SRPRB-202ENST00000466636 NMUR1Q9HB89 426 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 ANLNQ9NQW6 1124 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 ZDHHC18Q9NUE0 388 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 FAM53CQ9NYF3 392 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 SPG21Q9NZD8 308 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 FAM153AQ9UHL3 310 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 FEZ2Q9UHY8 353 aaPredicted RBP9.92□□□□□ -0.82
SRPRB-202ENST00000466636 SCML2Q9UQR0 700 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 SNX24Q9Y343 169 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 CDY1Q9Y6F8 540 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 TTC3P53804 2025 aa9.92□□□□□ -0.82
SRPRB-202ENST00000466636 TDRD15B5MCY1 1934 aaKnown RBP9.92□□□□□ -0.82
SRPRB-202ENST00000466636 CARNS1A5YM72 827 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 I6L893 689 aaPredicted RBP9.91□□□□□ -0.82
SRPRB-202ENST00000466636 APOL1O14791 398 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 SOAT2O75908 522 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 GAS8O95995 478 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 F9P00740 461 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 FGBP02675 491 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 ITGAVP06756 1048 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 LINC00271P0C7V0 271 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 RPL17P18621 184 aaKnown RBP9.91□□□□□ -0.82
SRPRB-202ENST00000466636 TGM2P21980 687 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 IVDP26440 423 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 KLRC2P26717 231 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 GBP1P32455 592 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 ADRA1BP35368 520 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 TNNT3P45378 269 aaPredicted RBP9.91□□□□□ -0.82
SRPRB-202ENST00000466636 GLUD2P49448 558 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 DSG1Q02413 1049 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 LMNB2Q03252 620 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 FPGSQ05932 587 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 IFRD2Q12894 506 aaPredicted RBP9.91□□□□□ -0.82
SRPRB-202ENST00000466636 BYSLQ13895 437 aaKnown RBP9.91□□□□□ -0.82
SRPRB-202ENST00000466636 HLTFQ14527 1009 aaKnown RBP eCLIP9.91□□□□□ -0.82
SRPRB-202ENST00000466636 NOMO1Q15155 1222 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 PPP1R7Q15435 360 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 SPOUT1Q5T280 376 aaKnown RBP9.91□□□□□ -0.82
SRPRB-202ENST00000466636 NPNTQ6UXI9 565 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 DDX53Q86TM3 631 aaKnown RBP9.91□□□□□ -0.82
SRPRB-202ENST00000466636 PYROXD2Q8N2H3 581 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 MREGQ8N565 214 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 ALLCQ8N6M5 410 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 PLD5Q8N7P1 536 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 STKLD1Q8NE28 680 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 SPATA17Q96L03 361 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 CCDC114Q96M63 670 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 GDAP1L1Q96MZ0 367 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 CSPG4P5Q96PW8 444 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 YME1L1Q96TA2 773 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 CLSTN3Q9BQT9 956 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 MAK16Q9BXY0 300 aaKnown RBP9.91□□□□□ -0.82
SRPRB-202ENST00000466636 SMOC2Q9H3U7 446 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 FBXO44Q9H4M3 255 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 FAM204AQ9H8W3 233 aa9.91□□□□□ -0.82
SRPRB-202ENST00000466636 TMPRSS4Q9NRS4 437 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms