RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 PCDHA3Q9Y5H8 950 aa19.39■□□□□ 0.7
CAPN3-209ENST00000466222 XIRP2A4UGR9 3374 aa19.39■□□□□ 0.69
CAPN3-209ENST00000466222 CNPP09543 421 aaKnown RBP19.39■□□□□ 0.69
CAPN3-209ENST00000466222 HAPLN1P10915 354 aaPredicted RBP19.39■□□□□ 0.69
CAPN3-209ENST00000466222 PYGMP11217 842 aa19.39■□□□□ 0.69
CAPN3-209ENST00000466222 ATF6P18850 670 aa19.39■□□□□ 0.69
CAPN3-209ENST00000466222 SLC1A1P43005 524 aa19.39■□□□□ 0.69
CAPN3-209ENST00000466222 PPP2R2AP63151 447 aa19.39■□□□□ 0.69
CAPN3-209ENST00000466222 SEL1L2Q5TEA6 688 aa19.39■□□□□ 0.69
CAPN3-209ENST00000466222 NIPA2Q8N8Q9 360 aa19.39■□□□□ 0.69
CAPN3-209ENST00000466222 ZNF461Q8TAF7 563 aa19.39■□□□□ 0.69
CAPN3-209ENST00000466222 SPPL2BQ8TCT7 592 aa19.39■□□□□ 0.69
CAPN3-209ENST00000466222 FNIP1Q8TF40 1166 aa19.39■□□□□ 0.69
CAPN3-209ENST00000466222 C8orf48Q96LL4 319 aa19.39■□□□□ 0.69
CAPN3-209ENST00000466222 DPH5Q9H2P9 285 aa19.39■□□□□ 0.69
CAPN3-209ENST00000466222 CNOT10Q9H9A5 744 aaKnown RBP19.39■□□□□ 0.69
CAPN3-209ENST00000466222 PCYOX1Q9UHG3 505 aa19.39■□□□□ 0.69
CAPN3-209ENST00000466222 HIDE1A8MVS5 230 aa19.38■□□□□ 0.69
CAPN3-209ENST00000466222 ABLIM3O94929 683 aa19.38■□□□□ 0.69
CAPN3-209ENST00000466222 CXCL14O95715 111 aa19.38■□□□□ 0.69
CAPN3-209ENST00000466222 NUDT17P0C025 328 aa19.38■□□□□ 0.69
CAPN3-209ENST00000466222 CTSAP10619 480 aa19.38■□□□□ 0.69
CAPN3-209ENST00000466222 MAGEA11P43364 429 aa19.38■□□□□ 0.69
CAPN3-209ENST00000466222 SMTNL2Q2TAL5 461 aa19.38■□□□□ 0.69
CAPN3-209ENST00000466222 EFHC1Q5JVL4 640 aa19.38■□□□□ 0.69
CAPN3-209ENST00000466222 PM20D1Q6GTS8 502 aa19.38■□□□□ 0.69
CAPN3-209ENST00000466222 JAMLQ86YT9 394 aa19.38■□□□□ 0.69
CAPN3-209ENST00000466222 ADAM32Q8TC27 787 aa19.38■□□□□ 0.69
CAPN3-209ENST00000466222 SPPL3Q8TCT6 385 aa19.38■□□□□ 0.69
CAPN3-209ENST00000466222 POF1BQ8WVV4 589 aa19.38■□□□□ 0.69
CAPN3-209ENST00000466222 GDF15Q99988 308 aa19.38■□□□□ 0.69
CAPN3-209ENST00000466222 TCF25Q9BQ70 676 aa19.38■□□□□ 0.69
CAPN3-209ENST00000466222 CNPY3Q9BT09 278 aa19.38■□□□□ 0.69
CAPN3-209ENST00000466222 PNPLA8Q9NP80 782 aa19.38■□□□□ 0.69
CAPN3-209ENST00000466222 NGRNQ9NPE2 291 aaKnown RBP19.38■□□□□ 0.69
CAPN3-209ENST00000466222 CTNNA2P26232 953 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 MIPP30301 263 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 SDC4P31431 198 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 MAN1A1P33908 653 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 KCTD19Q17RG1 926 aaPredicted RBP19.37■□□□□ 0.69
CAPN3-209ENST00000466222 SKIDA1Q1XH10 827 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 ANKS1BQ7Z6G8 1248 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 FAM172AQ8WUF8 416 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 PEBP4Q96S96 227 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 CCT8L2Q96SF2 557 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 TBCBQ99426 244 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 TRIM51Q9BSJ1 452 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 OXCT2Q9BYC2 517 aaPredicted RBP19.37■□□□□ 0.69
CAPN3-209ENST00000466222 CENPHQ9H3R5 247 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 ZWILCHQ9H900 591 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 CYP4F11Q9HBI6 524 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 ZDHHC18Q9NUE0 388 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 SYNJ2BP-COX16A0A087WUM0 186 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.37■□□□□ 0.69
CAPN3-209ENST00000466222 GRM6O15303 877 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 FBXO21O94952 628 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 ATF2P15336 505 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 IRS1P35568 1242 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 SLC25A11Q02978 314 aaKnown RBP19.37■□□□□ 0.69
CAPN3-209ENST00000466222 CAMK1Q14012 370 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 OTUD1Q5VV17 481 aaPredicted RBP19.37■□□□□ 0.69
CAPN3-209ENST00000466222 BSPRYQ5W0U4 402 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 SCD5Q86SK9 330 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 NUP93Q8N1F7 819 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 C11orf84Q9BUA3 381 aaPredicted RBP19.37■□□□□ 0.69
CAPN3-209ENST00000466222 DDX23Q9BUQ8 820 aaKnown RBP19.37■□□□□ 0.69
CAPN3-209ENST00000466222 MAGEB5Q9BZ81 275 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 NMUR1Q9HB89 426 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 POPDC2Q9HBU9 364 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 OSER1Q9NX31 292 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.37■□□□□ 0.69
CAPN3-209ENST00000466222 COX16Q9P0S2 106 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 NUDT5Q9UKK9 219 aa19.37■□□□□ 0.69
CAPN3-209ENST00000466222 PI4K2BG5E9Z4 385 aa19.36■□□□□ 0.69
CAPN3-209ENST00000466222 LTFP02788 710 aa19.36■□□□□ 0.69
CAPN3-209ENST00000466222 NCAM1P13591 858 aa19.36■□□□□ 0.69
CAPN3-209ENST00000466222 HPDP32754 393 aaPredicted RBP19.36■□□□□ 0.69
CAPN3-209ENST00000466222 SCNN1AP37088 669 aa19.36■□□□□ 0.69
CAPN3-209ENST00000466222 MATKP42679 507 aa19.36■□□□□ 0.69
CAPN3-209ENST00000466222 HDAC4P56524 1084 aa19.36■□□□□ 0.69
CAPN3-209ENST00000466222 IFFO1Q0D2I5 559 aa19.36■□□□□ 0.69
CAPN3-209ENST00000466222 RAB33AQ14088 237 aa19.36■□□□□ 0.69
CAPN3-209ENST00000466222 CYP1B1Q16678 543 aa19.36■□□□□ 0.69
CAPN3-209ENST00000466222 KRT71Q3SY84 523 aa19.36■□□□□ 0.69
CAPN3-209ENST00000466222 PLPP4Q5VZY2 271 aa19.36■□□□□ 0.69
CAPN3-209ENST00000466222 ADAT2Q7Z6V5 191 aaKnown RBP19.36■□□□□ 0.69
CAPN3-209ENST00000466222 RHOT1Q8IXI2 618 aa19.36■□□□□ 0.69
CAPN3-209ENST00000466222 MICALL1Q8N3F8 863 aa19.36■□□□□ 0.69
CAPN3-209ENST00000466222 OR2W6PQ8NHA6 318 aa19.36■□□□□ 0.69
CAPN3-209ENST00000466222 TLCD1Q96CP7 247 aa19.36■□□□□ 0.69
CAPN3-209ENST00000466222 PBX4Q9BYU1 374 aa19.36■□□□□ 0.69
CAPN3-209ENST00000466222 ASNSD1Q9NWL6 643 aa19.36■□□□□ 0.69
CAPN3-209ENST00000466222 AFF4Q9UHB7 1163 aaKnown RBP19.36■□□□□ 0.69
CAPN3-209ENST00000466222 NR2E1Q9Y466 385 aa19.36■□□□□ 0.69
CAPN3-209ENST00000466222 GMNCA6NCL1 334 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 PTGIRP43119 386 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 SMARCB1Q12824 385 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 SCYL2Q6P3W7 929 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 DENND5BQ6ZUT9 1274 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 CYP4V2Q6ZWL3 525 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms