RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 C10orf76Q5T2E6 689 aa22.8■■□□□ 1.24
LIME1-203ENST00000465591 SCML4Q8N228 414 aa22.8■■□□□ 1.24
LIME1-203ENST00000465591 TPSD1Q9BZJ3 242 aa22.8■■□□□ 1.24
LIME1-203ENST00000465591 CNGB3Q9NQW8 809 aa22.8■■□□□ 1.24
LIME1-203ENST00000465591 WDR35Q9P2L0 1181 aa22.8■■□□□ 1.24
LIME1-203ENST00000465591 SFMBT1Q9UHJ3 866 aa22.8■■□□□ 1.24
LIME1-203ENST00000465591 BECN2A8MW95 431 aa22.79■■□□□ 1.24
LIME1-203ENST00000465591 CISD3P0C7P0 127 aa22.79■■□□□ 1.24
LIME1-203ENST00000465591 ID4P47928 161 aa22.79■■□□□ 1.24
LIME1-203ENST00000465591 DGKEP52429 567 aa22.79■■□□□ 1.24
LIME1-203ENST00000465591 STILQ15468 1287 aa22.79■■□□□ 1.24
LIME1-203ENST00000465591 GRAMD4Q6IC98 578 aa22.79■■□□□ 1.24
LIME1-203ENST00000465591 ANO7Q6IWH7 933 aa22.79■■□□□ 1.24
LIME1-203ENST00000465591 DENND1BQ6P3S1 775 aa22.79■■□□□ 1.24
LIME1-203ENST00000465591 RASSF3Q86WH2 238 aa22.79■■□□□ 1.24
LIME1-203ENST00000465591 DENND1CQ8IV53 801 aa22.79■■□□□ 1.24
LIME1-203ENST00000465591 FMNL3Q8IVF7 1028 aa22.79■■□□□ 1.24
LIME1-203ENST00000465591 MDGA1Q8NFP4 955 aa22.79■■□□□ 1.24
LIME1-203ENST00000465591 AJAP1Q9UKB5 411 aaPredicted RBP22.79■■□□□ 1.24
LIME1-203ENST00000465591 STRIP2Q9ULQ0 834 aa22.79■■□□□ 1.24
LIME1-203ENST00000465591 USP18Q9UMW8 372 aa22.79■■□□□ 1.24
LIME1-203ENST00000465591 INVSQ9Y283 1065 aa22.79■■□□□ 1.24
LIME1-203ENST00000465591 THADAQ6YHU6 1953 aa22.78■■□□□ 1.24
LIME1-203ENST00000465591 PRRT4C9JH25 899 aa22.78■■□□□ 1.24
LIME1-203ENST00000465591 GPD2P43304 727 aa22.78■■□□□ 1.24
LIME1-203ENST00000465591 MTIF2P46199 727 aaKnown RBP22.78■■□□□ 1.24
LIME1-203ENST00000465591 TRIP4Q15650 581 aaPredicted RBP22.78■■□□□ 1.24
LIME1-203ENST00000465591 HSP90AA4PQ58FG1 418 aa22.78■■□□□ 1.24
LIME1-203ENST00000465591 FYB2Q5VWT5 728 aa22.78■■□□□ 1.24
LIME1-203ENST00000465591 GBP6Q6ZN66 633 aa22.78■■□□□ 1.24
LIME1-203ENST00000465591 XPO6Q96QU8 1125 aaKnown RBP22.78■■□□□ 1.24
LIME1-203ENST00000465591 SIX2Q9NPC8 291 aa22.78■■□□□ 1.24
LIME1-203ENST00000465591 CACNA1AO00555 2505 aa22.78■■□□□ 1.24
LIME1-203ENST00000465591 MSI1O43347 362 aaKnown RBP22.77■■□□□ 1.24
LIME1-203ENST00000465591 PENKP01210 267 aaPredicted RBP22.77■■□□□ 1.24
LIME1-203ENST00000465591 PON1P27169 355 aa22.77■■□□□ 1.24
LIME1-203ENST00000465591 EGFLAMQ63HQ2 1017 aa22.77■■□□□ 1.24
LIME1-203ENST00000465591 CACNA2D4Q7Z3S7 1137 aa22.77■■□□□ 1.24
LIME1-203ENST00000465591 ZNF513Q8N8E2 541 aaPredicted RBP22.77■■□□□ 1.24
LIME1-203ENST00000465591 GPT2Q8TD30 523 aa22.77■■□□□ 1.24
LIME1-203ENST00000465591 HSFY1Q96LI6 401 aa22.77■■□□□ 1.24
LIME1-203ENST00000465591 ACOX2Q99424 681 aa22.77■■□□□ 1.24
LIME1-203ENST00000465591 DCLK3Q9C098 648 aa22.77■■□□□ 1.24
LIME1-203ENST00000465591 THAP9Q9H5L6 903 aa22.77■■□□□ 1.24
LIME1-203ENST00000465591 ABCC13Q9NSE7 274 aa22.77■■□□□ 1.24
LIME1-203ENST00000465591 OLA1Q9NTK5 396 aaKnown RBP22.77■■□□□ 1.24
LIME1-203ENST00000465591 CYTH4Q9UIA0 394 aa22.77■■□□□ 1.24
LIME1-203ENST00000465591 FBXO10Q9UK96 956 aa22.77■■□□□ 1.24
LIME1-203ENST00000465591 ZNF510Q9Y2H8 683 aa22.77■■□□□ 1.24
LIME1-203ENST00000465591 DNAH14Q0VDD8 3507 aa22.77■■□□□ 1.23
LIME1-203ENST00000465591 NUP205Q92621 2012 aa22.76■■□□□ 1.23
LIME1-203ENST00000465591 GON4LQ3T8J9 2241 aa22.76■■□□□ 1.23
LIME1-203ENST00000465591 LETM1O95202 739 aaPredicted RBP22.76■■□□□ 1.23
LIME1-203ENST00000465591 ERCC5P28715 1186 aaPredicted RBP22.76■■□□□ 1.23
LIME1-203ENST00000465591 WASP42768 502 aa22.76■■□□□ 1.23
LIME1-203ENST00000465591 RPL34P49207 117 aaKnown RBP22.76■■□□□ 1.23
LIME1-203ENST00000465591 TPD52L1Q16890 204 aaPredicted RBP22.76■■□□□ 1.23
LIME1-203ENST00000465591 ARHGAP44Q17R89 818 aa22.76■■□□□ 1.23
LIME1-203ENST00000465591 EXOC3L4Q17RC7 722 aa22.76■■□□□ 1.23
LIME1-203ENST00000465591 PLK5Q496M5 336 aa22.76■■□□□ 1.23
LIME1-203ENST00000465591 HSF5Q4G112 596 aaPredicted RBP22.76■■□□□ 1.23
LIME1-203ENST00000465591 MIIPQ5JXC2 388 aa22.76■■□□□ 1.23
LIME1-203ENST00000465591 DPY19L2P1Q6NXN4 242 aa22.76■■□□□ 1.23
LIME1-203ENST00000465591 FAM217AQ8IXS0 508 aa22.76■■□□□ 1.23
LIME1-203ENST00000465591 RNF139Q8WU17 664 aa22.76■■□□□ 1.23
LIME1-203ENST00000465591 ZNF606Q8WXB4 792 aa22.76■■□□□ 1.23
LIME1-203ENST00000465591 PLD4Q96BZ4 506 aa22.76■■□□□ 1.23
LIME1-203ENST00000465591 ZC3H10Q96K80 434 aaKnown RBP22.76■■□□□ 1.23
LIME1-203ENST00000465591 MIS12Q9H081 205 aa22.76■■□□□ 1.23
LIME1-203ENST00000465591 DUSP15Q9H1R2 295 aaPredicted RBP22.76■■□□□ 1.23
LIME1-203ENST00000465591 APEX2Q9UBZ4 518 aa22.76■■□□□ 1.23
LIME1-203ENST00000465591 CLEC4EQ9ULY5 219 aa22.76■■□□□ 1.23
LIME1-203ENST00000465591 STARD13Q9Y3M8 1113 aa22.76■■□□□ 1.23
LIME1-203ENST00000465591 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.76■■□□□ 1.23
LIME1-203ENST00000465591 GTPBP10A4D1E9 387 aaKnown RBP22.75■■□□□ 1.23
LIME1-203ENST00000465591 FYNP06241 537 aa22.75■■□□□ 1.23
LIME1-203ENST00000465591 DGKGP49619 791 aa22.75■■□□□ 1.23
LIME1-203ENST00000465591 MFAP3P55082 362 aa22.75■■□□□ 1.23
LIME1-203ENST00000465591 CCDC6Q16204 474 aa22.75■■□□□ 1.23
LIME1-203ENST00000465591 MAN2A1Q16706 1144 aa22.75■■□□□ 1.23
LIME1-203ENST00000465591 EOGTQ5NDL2 527 aa22.75■■□□□ 1.23
LIME1-203ENST00000465591 MSANTD2Q6P1R3 559 aa22.75■■□□□ 1.23
LIME1-203ENST00000465591 ENOSF1Q7L5Y1 443 aa22.75■■□□□ 1.23
LIME1-203ENST00000465591 GPR161Q8N6U8 529 aaKnown RBP22.75■■□□□ 1.23
LIME1-203ENST00000465591 IRGQQ8WZA9 623 aa22.75■■□□□ 1.23
LIME1-203ENST00000465591 SEMA4GQ9NTN9 838 aa22.75■■□□□ 1.23
LIME1-203ENST00000465591 HBS1LQ9Y450 684 aaKnown RBP22.75■■□□□ 1.23
LIME1-203ENST00000465591 PLXND1Q9Y4D7 1925 aa22.74■■□□□ 1.23
LIME1-203ENST00000465591 SPTBN2O15020 2390 aa22.74■■□□□ 1.23
LIME1-203ENST00000465591 THAP12O43422 761 aa22.74■■□□□ 1.23
LIME1-203ENST00000465591 LTFP02788 710 aa22.74■■□□□ 1.23
LIME1-203ENST00000465591 BCKDHBP21953 392 aa22.74■■□□□ 1.23
LIME1-203ENST00000465591 GNA15P30679 374 aa22.74■■□□□ 1.23
LIME1-203ENST00000465591 CHKAP35790 457 aa22.74■■□□□ 1.23
LIME1-203ENST00000465591 RSPO4Q2I0M5 234 aaPredicted RBP22.74■■□□□ 1.23
LIME1-203ENST00000465591 PREPLQ4J6C6 727 aaPredicted RBP22.74■■□□□ 1.23
LIME1-203ENST00000465591 SCUBE3Q8IX30 993 aa22.74■■□□□ 1.23
LIME1-203ENST00000465591 CPXM2Q8N436 756 aa22.74■■□□□ 1.23
LIME1-203ENST00000465591 OLIG1Q8TAK6 271 aa22.74■■□□□ 1.23
LIME1-203ENST00000465591 SHC3Q92529 594 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms