RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 ADAMTS5Q9UNA0 930 aa4.21□□□□□ -1.74
HMGXB4-205ENST00000464480 CNTN6Q9UQ52 1028 aa4.21□□□□□ -1.74
HMGXB4-205ENST00000464480 EPN1Q9Y6I3 576 aaPredicted RBP4.21□□□□□ -1.74
HMGXB4-205ENST00000464480 FER1L4A9Z1Z3 1794 aa4.21□□□□□ -1.74
HMGXB4-205ENST00000464480 FAM90A18PA6NE21 464 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 FAM90A16PA6NEW6 464 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 FAM90A9PA6NNJ1 464 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 FAM90A5PA8MXJ8 464 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 H0Y3Z8 333 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 FAM155BO75949 473 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 CER1O95813 267 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 FAM90A15PP0C7V4 464 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 FAM90A14PP0C7W9 464 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 JUPP14923 745 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 TNFRSF1AP19438 455 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 TACR2P21452 398 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 MATN1P21941 496 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 ADD2P35612 726 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 AARSP49588 968 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 MCM2P49736 904 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 DIO1P49895 249 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 PRKAA2P54646 552 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 FOXI1Q12951 378 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 ERCC6LQ2NKX8 1250 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 PCID2Q5JVF3 399 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 ZNF569Q5MCW4 686 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 FBXO47Q5MNV8 452 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 IGFL4Q6B9Z1 124 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 GRHL2Q6ISB3 625 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 SLC29A4Q7RTT9 530 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 MOGAT3Q86VF5 341 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 SFTPA1Q8IWL2 248 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 FTSJ3Q8IY81 847 aaKnown RBP4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 PAF1Q8N7H5 531 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 NEU4Q8WWR8 484 aaPredicted RBP4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 TBC1D5Q92609 795 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 LARP4BQ92615 738 aaKnown RBP4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 SDCCAG3Q96C92 435 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 PDLIM2Q96JY6 352 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 NAP1L4Q99733 375 aaKnown RBP4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 PYM1Q9BRP8 204 aaKnown RBP4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 KRTAP9-3Q9BYQ3 159 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 VPS16Q9H269 839 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 TOR3AQ9H497 397 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 CCDC134Q9H6E4 229 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 LIN7CQ9NUP9 197 aaKnown RBP4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 SAGE1Q9NXZ1 904 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 RRN3Q9NYV6 651 aa4.2□□□□□ -1.74
HMGXB4-205ENST00000464480 KIF28PB7ZC32 967 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 EIF3FO00303 357 aaPredicted RBP4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 CA12O43570 354 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 FZD7O75084 574 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 TK1P04183 234 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 FAM163BP0C2L3 166 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 C6P13671 934 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 DRD4P21917 467 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 PAX3P23760 479 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 SERPINA4P29622 427 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 THBS4P35443 961 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 IGHMBP2P38935 993 aaKnown RBP4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 CDK7P50613 346 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 ACTR2P61160 394 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 DEUP1Q05D60 604 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 CCDC15Q0P6D6 951 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 DNASE1L3Q13609 305 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 EFR3AQ14156 821 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 ZNF169Q14929 603 aaPredicted RBP4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 TMEM63BQ5T3F8 832 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 LAIR1Q6GTX8 287 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 KIRREL2Q6UWL6 708 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 CYP26C1Q6V0L0 522 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 RRAGAQ7L523 313 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 GGNQ86UU5 652 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 SUGP1Q8IWZ8 645 aaKnown RBP4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 AFG1LQ8WV93 481 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 GOLGA1Q92805 767 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 USP13Q92995 863 aaPredicted RBP4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 UBXN10Q96LJ8 280 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 LENG8Q96PV6 779 aaPredicted RBP4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 USP29Q9HBJ7 922 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 KCNK9Q9NPC2 374 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 TMLHEQ9NVH6 421 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 TFCP2L1Q9NZI6 479 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 FOXJ2Q9P0K8 574 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 FEM1BQ9UK73 627 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 PACSIN3Q9UKS6 424 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 ASAP1Q9ULH1 1129 aa4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 LRRFIP2Q9Y608 721 aaKnown RBP4.19□□□□□ -1.74
HMGXB4-205ENST00000464480 NCAM2O15394 837 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 RHOBTB3O94955 611 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 TMIGD3P0DMS9 266 aaPredicted RBP4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 ALADP13716 330 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 FPR3P25089 353 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 CXCR5P32302 372 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 PSG6Q00889 435 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 RNASELQ05823 741 aaKnown RBP4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 LMAN2Q12907 356 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 CUL4BQ13620 913 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 FAM187BQ17R55 369 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 AAK1Q2M2I8 961 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms