RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 NXNQ6DKJ4 435 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 PPP4R4Q6NUP7 873 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 CYP20A1Q6UW02 462 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 ALYREFQ86V81 257 aaKnown RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 CAND1Q86VP6 1230 aaKnown RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 NUDCD3Q8IVD9 361 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 CCDC28AQ8IWP9 274 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 PPM1KQ8N3J5 372 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 CPSF7Q8N684 471 aaKnown RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 ATP6V0D2Q8N8Y2 350 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 GSTCDQ8NEC7 633 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 SHKBP1Q8TBC3 707 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 ATL1Q8WXF7 558 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 WASF1Q92558 559 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 DPF3Q92784 378 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 DCPSQ96C86 337 aaKnown RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 COG3Q96JB2 828 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 PLIN2Q99541 437 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 CRISPLD1Q9H336 500 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 TRIT1Q9H3H1 467 aaKnown RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 SERHL2Q9H4I8 314 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 TLE6Q9H808 572 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 RIC8AQ9NPQ8 531 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 SNTG2Q9NY99 539 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 STMN3Q9NZ72 180 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 KCNN3Q9UGI6 736 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 ARMCX3Q9UH62 379 aaPredicted RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 CPSF3Q9UKF6 684 aaKnown RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 ADAMTS6Q9UKP5 1117 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 ARHGAP26Q9UNA1 814 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 KCNJ14Q9UNX9 436 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 GJA3Q9Y6H8 435 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 ABCB11O95342 1321 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 MED23Q9ULK4 1368 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 MYH1P12882 1939 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 BICDL2A1A5D9 508 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ILVBLA1L0T0 632 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 TRIM64A6NGJ6 449 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 TRIM64BA6NI03 449 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 MEI4A8MW99 385 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 POC1B-GALNT4F8VUJ3 575 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 KPNA4O00629 521 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 CASQ2O14958 399 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ATP2A1O14983 1001 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 FOXP2O15409 715 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 RIPK2O43353 540 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 CLASP2O75122 1294 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SCO1O75880 301 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 KLHL2O95198 593 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 FGGP02679 453 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SRGNP10124 158 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 POLR2CP19387 275 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 MX2P20592 715 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ABCB4P21439 1286 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ZAP70P43403 619 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 CBX5P45973 191 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 PHKA1P46020 1223 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 CLK1P49759 484 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 EPHB1P54762 984 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 MARSP56192 900 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ARPP19P56211 112 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF280AP59817 542 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 UBXN2AP68543 259 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 MYBPC1Q00872 1141 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 POU5F1Q01860 360 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SMARCB1Q12824 385 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 AIMP1Q12904 312 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 HNRNPDQ14103 355 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 DPYSQ14117 519 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 TMED2Q15363 201 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 TRIM71Q2Q1W2 868 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 HP1BP3Q5SSJ5 553 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 C6orf52Q5T4I8 152 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 FAM205BPQ63HN1 556 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF600Q6ZNG1 722 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 EPM2AIP1Q7L775 607 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 DSG4Q86SJ6 1040 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 GLRX5Q86SX6 157 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 MICU3Q86XE3 530 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 CATSPER3Q86XQ3 398 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 IRF2BP1Q8IU81 584 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 REXO1Q8N1G1 1221 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SLC15A4Q8N697 577 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 METTL13Q8N6R0 699 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 EIF1ADQ8N9N8 165 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 TPCN2Q8NHX9 752 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 FBXO27Q8NI29 283 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 DDI1Q8WTU0 396 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ZDHHC1Q8WTX9 485 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SCFD2Q8WU76 684 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 FAM172AQ8WUF8 416 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 C10orf82Q8WW14 230 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SNX19Q92543 992 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 FIG4Q92562 907 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF486Q96H40 463 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 METTL2AQ96IZ6 378 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 FEM1CQ96JP0 617 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms