RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 CEP112Q8N8E3 955 aa15.85■□□□□ 0.13
TMEM39A-203ENST00000461654 MNS1Q8NEH6 495 aa15.85■□□□□ 0.13
TMEM39A-203ENST00000461654 PIWIL1Q96J94 861 aaKnown RBP15.85■□□□□ 0.13
TMEM39A-203ENST00000461654 SPATA17Q96L03 361 aa15.85■□□□□ 0.13
TMEM39A-203ENST00000461654 PRRX2Q99811 253 aa15.85■□□□□ 0.13
TMEM39A-203ENST00000461654 L2HGDHQ9H9P8 463 aa15.85■□□□□ 0.13
TMEM39A-203ENST00000461654 CYP4F11Q9HBI6 524 aa15.85■□□□□ 0.13
TMEM39A-203ENST00000461654 RRN3Q9NYV6 651 aa15.85■□□□□ 0.13
TMEM39A-203ENST00000461654 USP3Q9Y6I4 520 aa15.85■□□□□ 0.13
TMEM39A-203ENST00000461654 VWA8A3KMH1 1905 aa15.85■□□□□ 0.13
TMEM39A-203ENST00000461654 ANHXE9PGG2 379 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 TNFRSF10BO14763 440 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 SRGAP2O75044 1071 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 XYLBO75191 536 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 LTFP02788 710 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 KRT7P08729 469 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 CXCR5P32302 372 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 GBP2P32456 591 aaPredicted RBP15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 NOS2P35228 1153 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 FLT3P36888 993 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 ALDH1A3P47895 512 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 NUBP1P53384 320 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 ZNF252P-AS1Q0IIN9 211 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 VEPH1Q14D04 833 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 TAF12Q16514 161 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 DCAF6Q58WW2 860 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 SEL1L2Q5TEA6 688 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 LRRC38Q5VT99 294 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 DEFB106AQ8N104 65 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 SLC7A14Q8TBB6 771 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 CD101Q93033 1021 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 CAPZA3Q96KX2 299 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 MYADMQ96S97 322 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 DDX23Q9BUQ8 820 aaKnown RBP15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 CARD9Q9H257 536 aa15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 DDX56Q9NY93 547 aaKnown RBP15.84■□□□□ 0.13
TMEM39A-203ENST00000461654 YJEFN3A6XGL0 299 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 E7ENQ6 273 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 DDX3YO15523 660 aaKnown RBP15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 PRPSAP2O60256 369 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 CEP104O60308 925 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 FSHRP23945 695 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 YWHAQP27348 245 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 AVPR2P30518 371 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 PCK1P35558 622 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 GJC1P36383 396 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 SULT1E1P49888 294 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 ATP11AP98196 1134 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 PLD1Q13393 1074 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 CDO1Q16878 200 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 CCDC14Q49A88 953 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 BTBD8Q5XKL5 378 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 GRASPQ7Z6J2 395 aaPredicted RBP15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 TTC9BQ8N6N2 239 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 SCAMP5Q8TAC9 235 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 NDRG1Q92597 394 aaKnown RBP15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 CFAP57Q96MR6 1250 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 SLC2A13Q96QE2 648 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 NAP1L3Q99457 506 aaPredicted RBP15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 SMOC2Q9H3U7 446 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 DUSP12Q9UNI6 340 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 SCML2Q9UQR0 700 aa15.83■□□□□ 0.12
TMEM39A-203ENST00000461654 MYO10Q9HD67 2058 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 LRCH4O75427 683 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 SLU7O95391 586 aaKnown RBP15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 VNN2O95498 520 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 NCAM1P13591 858 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 GPR15P49685 360 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 PSEN1P49768 467 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 PEX5P50542 639 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 YWHAGP61981 247 aaKnown RBP eCLIP15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 SLC25A52Q3SY17 297 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 SDHAF4Q5VUM1 108 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 BSPRYQ5W0U4 402 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 SCYL2Q6P3W7 929 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 BEND5Q7L4P6 421 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 STRADAQ7RTN6 431 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 POLNQ7Z5Q5 900 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 MON1AQ86VX9 555 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 TCEAL8Q8IYN2 117 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 KATNAL2Q8IYT4 538 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 SLC44A3Q8N4M1 653 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 COG1Q8WTW3 980 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 RNF139Q8WU17 664 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 FAM172AQ8WUF8 416 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 KRT35Q92764 455 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 FBXO32Q969P5 355 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 SLITRK1Q96PX8 696 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 ABCC13Q9NSE7 274 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 TMEM51Q9NW97 253 aa15.82■□□□□ 0.12
TMEM39A-203ENST00000461654 CTAGE15A4D2H0 777 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 SLC38A8A6NNN8 435 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 RIOK3O14730 519 aaKnown RBP15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 ZNF185O15231 689 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 CCL16O15467 120 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 SOAT2O75908 522 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 ZRANB2O95218 330 aaKnown RBP eCLIP15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 CTAGE8P0CG41 777 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 CSH1P0DML2 217 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 CSH2P0DML3 217 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms