RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 SIM2Q14190 667 aaPredicted RBP4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 ZIK1Q3SY52 487 aaPredicted RBP4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 FAM209BQ5JX69 171 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 FAAH2Q6GMR7 532 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 CRELD2Q6UXH1 353 aaPredicted RBP4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 FAM9BQ8IZU0 186 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 GALNT4Q8N4A0 578 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 GPATCH11Q8N954 259 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 C8orf58Q8NAV2 365 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 OR56A3Q8NH54 315 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 TMEM171Q8WVE6 324 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 SNRNP27Q8WVK2 155 aaKnown RBP4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 IPCEF1Q8WWN9 437 aaPredicted RBP4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 WASF1Q92558 559 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 MAML1Q92585 1016 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 KIAA1191Q96A73 305 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 TRIM43Q96BQ3 446 aaPredicted RBP4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 NMD3Q96D46 503 aaKnown RBP4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 R3HDM4Q96D70 268 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 TMEM41AQ96HV5 264 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 PPM1MQ96MI6 270 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 FSD1LQ9BXM9 530 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 UNKQ9C0B0 810 aaKnown RBP4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 EBF3Q9H4W6 596 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 RRN3Q9NYV6 651 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 PCDHGB3Q9Y5G1 929 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 RPS6KL1Q9Y6S9 549 aa4.17□□□□□ -1.74
SPTLC1-203ENST00000461132 DYTNA2CJ06 578 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 POM121BA6NF01 834 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 H7C1Q1 480 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 J3KRW8 73 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 PSMD9O00233 223 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 FGBP02675 491 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 CSTBP04080 98 aaKnown RBP4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 CSF1RP07333 972 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 CHRM5P08912 532 aaPredicted RBP4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 TMEM191BP0C7N4 346 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 MTHFSP49914 203 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 ITGA8P53708 1063 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 POU5F1Q01860 360 aaKnown RBP4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 PRKG1Q13976 671 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 SLC29A2Q14542 456 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 ZNF268Q14587 947 aaPredicted RBP4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 DAZAP2Q15038 168 aaPredicted RBP4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 CERCAMQ5T4B2 595 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 SHC4Q6S5L8 630 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 ZDHHC24Q6UX98 284 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 MICU3Q86XE3 530 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 YAF2Q8IY57 180 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 IZUMO1Q8IYV9 350 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 PIGOQ8TEQ8 1089 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 TRAPPC12Q8WVT3 735 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 BRI3BPQ8WY22 251 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 USP13Q92995 863 aaPredicted RBP4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 ZSCAN31Q96LW9 406 aaPredicted RBP4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 GBA2Q9HCG7 927 aaPredicted RBP4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 RASSF1Q9NS23 344 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 KLHL13Q9P2N7 655 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 PI4KBQ9UBF8 816 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 ZNF580Q9UK33 172 aa4.16□□□□□ -1.74
SPTLC1-203ENST00000461132 H7C4K7 107 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 CCER2I3L3R5 266 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 M0R3H8 397 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 RAB27BO00194 218 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 APOL1O14791 398 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 FFAR2O15552 330 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 CCP110O43303 1012 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 SRGAP2O75044 1071 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 RNF8O76064 485 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 IL18RAPO95256 599 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 PARP1P09874 1014 aaKnown RBP4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 SFPQP23246 707 aaKnown RBP eCLIP4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 IL6STP40189 918 aaPredicted RBP4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 PTDSS1P48651 473 aaKnown RBP4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 CCNIQ14094 377 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 ARHGEF7Q14155 803 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 Q4G0T1 1027 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 LVRNQ6Q4G3 990 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 MTHFD1LQ6UB35 978 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 CAND1Q86VP6 1230 aaKnown RBP4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 SESTD1Q86VW0 696 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 ZDHHC17Q8IUH5 632 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 SAMD14Q8IZD0 417 aaPredicted RBP4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 ABRAQ8N0Z2 381 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 C1orf131Q8NDD1 294 aaKnown RBP4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 IL17REQ8NFR9 667 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 DNAJB14Q8TBM8 379 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 NEUROD6Q96NK8 337 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 MACROD1Q9BQ69 325 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 EIF2AK1Q9BQI3 630 aaKnown RBP4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 C17orf80Q9BSJ5 609 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 XPNPEP3Q9NQH7 507 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 SAGE1Q9NXZ1 904 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 NRBP1Q9UHY1 535 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 USP22Q9UPT9 525 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 AFG3L2Q9Y4W6 797 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 PCDHGB2Q9Y5G2 931 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 SNX14Q9Y5W7 946 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 CDY1Q9Y6F8 540 aa4.15□□□□□ -1.75
SPTLC1-203ENST00000461132 IGKV2D-30A0A075B6S6 120 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms