RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 NUDT22Q9BRQ3 303 aa5.46□□□□□ -1.54
VBP1-202ENST00000460509 CINPQ9BW66 212 aaPredicted RBP5.46□□□□□ -1.54
VBP1-202ENST00000460509 RIOX1Q9H6W3 641 aa5.46□□□□□ -1.54
VBP1-202ENST00000460509 SAP30LQ9HAJ7 183 aa5.46□□□□□ -1.54
VBP1-202ENST00000460509 HERC5Q9UII4 1024 aaKnown RBP5.46□□□□□ -1.54
VBP1-202ENST00000460509 PCDHB7Q9Y5E2 793 aa5.46□□□□□ -1.54
VBP1-202ENST00000460509 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.45□□□□□ -1.54
VBP1-202ENST00000460509 HMX3A6NHT5 357 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 CBFA2T3O75081 653 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 PPP6R2O75170 966 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 ACTL6BO94805 426 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 TJP3O95049 919 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 CER1O95813 267 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 NUDT3O95989 172 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 PPM1FP49593 454 aaPredicted RBP5.45□□□□□ -1.54
VBP1-202ENST00000460509 HOXA4Q00056 320 aaPredicted RBP5.45□□□□□ -1.54
VBP1-202ENST00000460509 RPS6KA2Q15349 733 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 TRIM71Q2Q1W2 868 aaKnown RBP5.45□□□□□ -1.54
VBP1-202ENST00000460509 STRIP1Q5VSL9 837 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 PIK3AP1Q6ZUJ8 805 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 PNPLA1Q8N8W4 532 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 OR1N1Q8NGS0 311 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 MCRS1Q96EZ8 462 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 SCLT1Q96NL6 688 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 RTKNQ9BST9 563 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 SYNPO2LQ9H987 977 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 FBXO28Q9NVF7 368 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 ADAM21Q9UKJ8 722 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 WNT6Q9Y6F9 365 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 KAT6AQ92794 2004 aa5.45□□□□□ -1.54
VBP1-202ENST00000460509 KIF28PB7ZC32 967 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 ZNF213O14771 459 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 GCATO75600 419 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 JTBO76095 146 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 TMIGD3P0DMS9 266 aaPredicted RBP5.44□□□□□ -1.54
VBP1-202ENST00000460509 BMP5P22003 454 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 ITPKBP27987 946 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 HMGA2P52926 109 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 AP2B1P63010 937 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 RNASELQ05823 741 aaKnown RBP5.44□□□□□ -1.54
VBP1-202ENST00000460509 KCNJ12Q14500 433 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 TMEM119Q4V9L6 283 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 INO80DQ53TQ3 878 aaPredicted RBP5.44□□□□□ -1.54
VBP1-202ENST00000460509 ZNF362Q5T0B9 420 aaPredicted RBP5.44□□□□□ -1.54
VBP1-202ENST00000460509 ANKRD40Q6AI12 368 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 MSANTD2Q6P1R3 559 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 TMEM65Q6PI78 240 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 TRIM72Q6ZMU5 477 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 C12orf76Q8N812 135 aaPredicted RBP5.44□□□□□ -1.54
VBP1-202ENST00000460509 SLC22A17Q8WUG5 538 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 TRAPPC12Q8WVT3 735 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 SORCS2Q96PQ0 1159 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 TIMP4Q99727 224 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 THAP7Q9BT49 309 aaPredicted RBP5.44□□□□□ -1.54
VBP1-202ENST00000460509 FAM167BQ9BTA0 163 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 TP63Q9H3D4 680 aaPredicted RBP5.44□□□□□ -1.54
VBP1-202ENST00000460509 CCDC134Q9H6E4 229 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 MLXIPQ9HAP2 919 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 AGO4Q9HCK5 861 aaKnown RBP5.44□□□□□ -1.54
VBP1-202ENST00000460509 PCDHGB3Q9Y5G1 929 aa5.44□□□□□ -1.54
VBP1-202ENST00000460509 LOC102724159A0A0B4J2E5 919 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 TARM1B6A8C7 271 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 CTIFO43310 598 aaKnown RBP5.43□□□□□ -1.54
VBP1-202ENST00000460509 PRAMEF2O60811 474 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 RPP40O75818 363 aaKnown RBP5.43□□□□□ -1.54
VBP1-202ENST00000460509 MMP8P22894 467 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 GALNSP34059 522 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 IGHMBP2P38935 993 aaKnown RBP5.43□□□□□ -1.54
VBP1-202ENST00000460509 RENBPP51606 427 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 POLE2P56282 527 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 SOX10P56693 466 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 POSTNQ15063 836 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 PWP2Q15269 919 aaKnown RBP5.43□□□□□ -1.54
VBP1-202ENST00000460509 TAF5Q15542 800 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 ZNF569Q5MCW4 686 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 FAM90A2PQ658T7 463 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 LIN54Q6MZP7 749 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 JMJD6Q6NYC1 403 aaPredicted RBP5.43□□□□□ -1.54
VBP1-202ENST00000460509 RRAGAQ7L523 313 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 CLASRPQ8N2M8 674 aaKnown RBP5.43□□□□□ -1.54
VBP1-202ENST00000460509 NKAPQ8N5F7 415 aaKnown RBP5.43□□□□□ -1.54
VBP1-202ENST00000460509 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.43□□□□□ -1.54
VBP1-202ENST00000460509 MAFAQ8NHW3 353 aaPredicted RBP5.43□□□□□ -1.54
VBP1-202ENST00000460509 SCAMP5Q8TAC9 235 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 HMGB4Q8WW32 186 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 OVCA2Q8WZ82 227 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 C3orf49Q96BT1 292 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 EID2BQ96D98 161 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 CCDC17Q96LX7 622 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 ELAC1Q9H777 363 aaKnown RBP5.43□□□□□ -1.54
VBP1-202ENST00000460509 VPS45Q9NRW7 570 aa5.43□□□□□ -1.54
VBP1-202ENST00000460509 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.43□□□□□ -1.54
VBP1-202ENST00000460509 IPO5O00410 1097 aaKnown RBP5.42□□□□□ -1.54
VBP1-202ENST00000460509 FYB1O15117 783 aa5.42□□□□□ -1.54
VBP1-202ENST00000460509 DHHO43323 396 aa5.42□□□□□ -1.54
VBP1-202ENST00000460509 PEPDP12955 493 aa5.42□□□□□ -1.54
VBP1-202ENST00000460509 THBS4P35443 961 aa5.42□□□□□ -1.54
VBP1-202ENST00000460509 CLK3P49761 638 aaKnown RBP5.42□□□□□ -1.54
VBP1-202ENST00000460509 GPC5P78333 572 aa5.42□□□□□ -1.54
VBP1-202ENST00000460509 RAE1P78406 368 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms