RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 ATG13O75143 517 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 TULP3O75386 442 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 GFPT2O94808 682 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 KAT7O95251 611 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 KLKB1P03952 638 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 ATP1A3P13637 1013 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 TYRP14679 529 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 TIE1P35590 1138 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 FBXO43Q4G163 708 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 GRAMD4Q6IC98 578 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 ASCL5Q7RTU5 278 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 ADAM32Q8TC27 787 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 PLD4Q96BZ4 506 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 NOX5Q96PH1 765 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 XPO6Q96QU8 1125 aaKnown RBP19.52■□□□□ 0.72
USP39-209ENST00000458268 HHIPQ96QV1 700 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 ZSCAN32Q9NX65 697 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 DEC1Q9P2X7 70 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 AGO1Q9UL18 857 aaKnown RBP19.52■□□□□ 0.72
USP39-209ENST00000458268 CEP83Q9Y592 693 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 SYNJ2BP-COX16A0A087WUM0 186 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 HARS2P49590 506 aaKnown RBP19.51■□□□□ 0.71
USP39-209ENST00000458268 BPIFB4P59827 614 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 NCAPHQ15003 741 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 KLHL40Q2TBA0 621 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 ZNF528Q3MIS6 628 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 C10orf76Q5T2E6 689 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 OR6B2Q6IFH4 312 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 DPY19L2P1Q6NXN4 242 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 Q6ZNB5 142 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 FAM71AQ8IYT1 594 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 ZNF276Q8N554 614 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 NEK11Q8NG66 645 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 PPP1R13BQ96KQ4 1090 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 SPAG5Q96R06 1193 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 SLC4A5Q9BY07 1137 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 GANQ9H2C0 597 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 COX16Q9P0S2 106 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 LIMA1Q9UHB6 759 aaKnown RBP19.51■□□□□ 0.71
USP39-209ENST00000458268 NAALADL1Q9UQQ1 740 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 ZNF510Q9Y2H8 683 aa19.51■□□□□ 0.71
USP39-209ENST00000458268 PRR23AA6NEV1 266 aa19.5■□□□□ 0.71
USP39-209ENST00000458268 SMTNL1A8MU46 457 aa19.5■□□□□ 0.71
USP39-209ENST00000458268 LGALS16A8MUM7 142 aa19.5■□□□□ 0.71
USP39-209ENST00000458268 F8VZ95 297 aa19.5■□□□□ 0.71
USP39-209ENST00000458268 K7EQS6 105 aa19.5■□□□□ 0.71
USP39-209ENST00000458268 HOXC11O43248 304 aaPredicted RBP19.5■□□□□ 0.71
USP39-209ENST00000458268 PAPSS1O43252 624 aaPredicted RBP19.5■□□□□ 0.71
USP39-209ENST00000458268 SART1O43290 800 aaKnown RBP19.5■□□□□ 0.71
USP39-209ENST00000458268 GRAP2O75791 330 aa19.5■□□□□ 0.71
USP39-209ENST00000458268 ZNF165P49910 485 aa19.5■□□□□ 0.71
USP39-209ENST00000458268 NRLP54845 237 aa19.5■□□□□ 0.71
USP39-209ENST00000458268 TBX4P57082 545 aa19.5■□□□□ 0.71
USP39-209ENST00000458268 LPAL2Q16609 132 aa19.5■□□□□ 0.71
USP39-209ENST00000458268 EMC10Q5UCC4 262 aa19.5■□□□□ 0.71
USP39-209ENST00000458268 PRR23BQ6ZRT6 265 aa19.5■□□□□ 0.71
USP39-209ENST00000458268 SCML4Q8N228 414 aa19.5■□□□□ 0.71
USP39-209ENST00000458268 IPO4Q8TEX9 1081 aaKnown RBP19.5■□□□□ 0.71
USP39-209ENST00000458268 ACDQ96AP0 544 aa19.5■□□□□ 0.71
USP39-209ENST00000458268 ERLEC1Q96DZ1 483 aa19.5■□□□□ 0.71
USP39-209ENST00000458268 CPXM1Q96SM3 734 aa19.5■□□□□ 0.71
USP39-209ENST00000458268 WDR35Q9P2L0 1181 aa19.5■□□□□ 0.71
USP39-209ENST00000458268 HBS1LQ9Y450 684 aaKnown RBP19.5■□□□□ 0.71
USP39-209ENST00000458268 EPHB6O15197 1021 aa19.49■□□□□ 0.71
USP39-209ENST00000458268 KLF8O95600 359 aaPredicted RBP19.49■□□□□ 0.71
USP39-209ENST00000458268 MOCS2O96007 188 aaPredicted RBP19.49■□□□□ 0.71
USP39-209ENST00000458268 CYBBP04839 570 aa19.49■□□□□ 0.71
USP39-209ENST00000458268 CYP11B1P15538 503 aa19.49■□□□□ 0.71
USP39-209ENST00000458268 CHKAP35790 457 aa19.49■□□□□ 0.71
USP39-209ENST00000458268 GRIA2P42262 883 aa19.49■□□□□ 0.71
USP39-209ENST00000458268 SRSF5Q13243 272 aaKnown RBP19.49■□□□□ 0.71
USP39-209ENST00000458268 DMC1Q14565 340 aa19.49■□□□□ 0.71
USP39-209ENST00000458268 DHX40Q8IX18 779 aaKnown RBP19.49■□□□□ 0.71
USP39-209ENST00000458268 ALLCQ8N6M5 410 aa19.49■□□□□ 0.71
USP39-209ENST00000458268 DQX1Q8TE96 717 aaKnown RBP19.49■□□□□ 0.71
USP39-209ENST00000458268 DDI1Q8WTU0 396 aa19.49■□□□□ 0.71
USP39-209ENST00000458268 PIWIL1Q96J94 861 aaKnown RBP19.49■□□□□ 0.71
USP39-209ENST00000458268 STK33Q9BYT3 514 aa19.49■□□□□ 0.71
USP39-209ENST00000458268 PCDHGC3Q9UN70 934 aa19.49■□□□□ 0.71
USP39-209ENST00000458268 PCDHGA2Q9Y5H1 932 aa19.49■□□□□ 0.71
USP39-209ENST00000458268 K7ESF4 209 aa19.48■□□□□ 0.71
USP39-209ENST00000458268 ZNF18P17022 549 aa19.48■□□□□ 0.71
USP39-209ENST00000458268 PTMSP20962 102 aa19.48■□□□□ 0.71
USP39-209ENST00000458268 HOXD11P31277 338 aaPredicted RBP19.48■□□□□ 0.71
USP39-209ENST00000458268 EIF2DP41214 584 aaKnown RBP19.48■□□□□ 0.71
USP39-209ENST00000458268 WASP42768 502 aa19.48■□□□□ 0.71
USP39-209ENST00000458268 DGKGP49619 791 aa19.48■□□□□ 0.71
USP39-209ENST00000458268 ARID5AQ03989 594 aa19.48■□□□□ 0.71
USP39-209ENST00000458268 TAF5Q15542 800 aa19.48■□□□□ 0.71
USP39-209ENST00000458268 TRIP4Q15650 581 aaPredicted RBP19.48■□□□□ 0.71
USP39-209ENST00000458268 MEA1Q16626 185 aa19.48■□□□□ 0.71
USP39-209ENST00000458268 TOGARAM2Q6ZUX3 1019 aa19.48■□□□□ 0.71
USP39-209ENST00000458268 FAM183BPQ6ZVS7 135 aa19.48■□□□□ 0.71
USP39-209ENST00000458268 WDTC1Q8N5D0 677 aa19.48■□□□□ 0.71
USP39-209ENST00000458268 USP33Q8TEY7 942 aa19.48■□□□□ 0.71
USP39-209ENST00000458268 STK32AQ8WU08 396 aa19.48■□□□□ 0.71
USP39-209ENST00000458268 NAA15Q9BXJ9 866 aaKnown RBP19.48■□□□□ 0.71
USP39-209ENST00000458268 LMNAP02545 664 aaKnown RBP19.47■□□□□ 0.71
USP39-209ENST00000458268 ERBB2P04626 1255 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 MMEP08473 750 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms