RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 MTMR9Q96QG7 549 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 PNKPQ96T60 521 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 SH2D3AQ9BRG2 576 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 CCDC94Q9BW85 323 aaPredicted RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 RNF26Q9BY78 433 aaPredicted RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 ZCWPW1Q9H0M4 648 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 TTC12Q9H892 705 aaPredicted RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 DUS2Q9NX74 493 aaKnown RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 HSPBP1Q9NZL4 362 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 UXTQ9UBK9 157 aaPredicted RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 TJP2Q9UDY2 1190 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 CCL26Q9Y258 94 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 FNDC3AQ9Y2H6 1198 aaKnown RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 CFAP46Q8IYW2 2715 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 A0A1W2PQF6 199 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 I3L4J1 428 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 K7ENP7 123 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 NPC1O15118 1278 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 YKT6O15498 198 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 ZBTB43O43298 467 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 PHACTR2O75167 634 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 MAP3K6O95382 1288 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 LARGE1O95461 756 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 TDP2O95551 362 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 KLF8O95600 359 aaPredicted RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 APODP05090 189 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 MUTP22033 750 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 MARCKSP29966 332 aaPredicted RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 OXTRP30559 389 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 GRIA4P48058 902 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 ACADVLP49748 655 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 YARSP54577 528 aaKnown RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 SLC7A9P82251 487 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 CYP4F8P98187 520 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 POU5F1Q01860 360 aaKnown RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 NUCB1Q02818 461 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 BNIP3Q12983 259 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 ORC1Q13415 861 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 ENPP2Q13822 863 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 INO80CQ6PI98 192 aaPredicted RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 ARMCX6Q7L4S7 300 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 MICU3Q86XE3 530 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 TXNDC5Q8NBS9 432 aaKnown RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 TBCKQ8TEA7 893 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 FBF1Q8TES7 1133 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 RLN3Q8WXF3 142 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 HAS1Q92839 578 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 GRAMD1AQ96CP6 724 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 HSPA12BQ96MM6 686 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 YTHDC1Q96MU7 727 aaKnown RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 POLR3FQ9H1D9 316 aaPredicted RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 CDT1Q9H211 546 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 SSU72Q9NP77 194 aaKnown RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 GPRC5CQ9NQ84 441 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 FSCN3Q9NQT6 498 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 WSB2Q9NYS7 404 aaPredicted RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 FRRS1LQ9P0K9 344 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 CALCOCO1Q9P1Z2 691 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 DSEQ9UL01 958 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 NUB1Q9Y5A7 615 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 ATXN2Q99700 1313 aaKnown RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 STK36Q9NRP7 1315 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 THADAQ6YHU6 1953 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 TRAV19A0A0A6YYK7 116 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 E2F8A0AVK6 867 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 TLDC2A0PJX2 215 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 MYMKA6NI61 221 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 PDE2AO00408 941 aaPredicted RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 PLK4O00444 970 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 PRPF40AO75400 957 aaKnown RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 RFPL3O75679 317 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 KAT7O95251 611 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 CYP17A1P05093 508 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 EDN1P05305 212 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 ITGB6P18564 788 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 CYP11B2P19099 503 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 RXRAP19793 462 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 CHMLP26374 656 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 CD6P30203 668 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 NTSR1P30989 418 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 ADMP35318 185 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 CCT8P50990 548 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 INHBCP55103 352 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 ARPP19P56211 112 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 EVCP57679 992 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 CXADRP78310 365 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 GRIN1Q05586 938 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 RAD51AP2Q09MP3 1159 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 NECTIN1Q15223 517 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 NPY5RQ15761 445 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 NTRK3Q16288 839 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 SPRED3Q2MJR0 410 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 HLA-BQ31612 363 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 C2orf27AQ580R0 203 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 ATF7IP2Q5U623 682 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 EMC10Q5UCC4 262 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 SCARA3Q6AZY7 606 aa2.28□□□□□ -2.04
NEDD1-204ENST00000457368 CDR2LQ86X02 465 aaPredicted RBP2.28□□□□□ -2.04
NEDD1-204ENST00000457368 TICAM1Q8IUC6 712 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms