RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 GOLGA1Q92805 767 aa14.68□□□□□ -0.06
TIMP1-205ENST00000456754 MCEEQ96PE7 176 aa14.68□□□□□ -0.06
TIMP1-205ENST00000456754 TBCBQ99426 244 aa14.68□□□□□ -0.06
TIMP1-205ENST00000456754 DEF6Q9H4E7 631 aa14.68□□□□□ -0.06
TIMP1-205ENST00000456754 TMPRSS4Q9NRS4 437 aa14.68□□□□□ -0.06
TIMP1-205ENST00000456754 ASNSD1Q9NWL6 643 aa14.68□□□□□ -0.06
TIMP1-205ENST00000456754 IMPACTQ9P2X3 320 aa14.68□□□□□ -0.06
TIMP1-205ENST00000456754 CNOT8Q9UFF9 292 aaKnown RBP14.68□□□□□ -0.06
TIMP1-205ENST00000456754 OTOL1A6NHN0 477 aaPredicted RBP14.67□□□□□ -0.06
TIMP1-205ENST00000456754 CAPN9O14815 690 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 SART1O43290 800 aaKnown RBP14.67□□□□□ -0.06
TIMP1-205ENST00000456754 TRUB2O95900 331 aaKnown RBP14.67□□□□□ -0.06
TIMP1-205ENST00000456754 IGLV3-25P01717 112 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 PFKLP17858 780 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 PSMC3P17980 439 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 VCPP55072 806 aaKnown RBP14.67□□□□□ -0.06
TIMP1-205ENST00000456754 MAMLD1Q13495 774 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 CCDC14Q49A88 953 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 DNAJC24Q6P3W2 148 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 KLHDC10Q6PID8 442 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 VPS36Q86VN1 386 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 ZDHHC17Q8IUH5 632 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 ZNF276Q8N554 614 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 MSANTD4Q8NCY6 345 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 C3orf20Q8ND61 904 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 RXFP2Q8WXD0 754 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 FCRL2Q96LA5 508 aaPredicted RBP14.67□□□□□ -0.06
TIMP1-205ENST00000456754 CCDC42Q96M95 316 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 SELENOOQ9BVL4 669 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 HPS4Q9NQG7 708 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 ANLNQ9NQW6 1124 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.67□□□□□ -0.06
TIMP1-205ENST00000456754 IGSF9Q9P2J2 1179 aa14.67□□□□□ -0.06
TIMP1-205ENST00000456754 XPO7Q9UIA9 1087 aaKnown RBP14.67□□□□□ -0.06
TIMP1-205ENST00000456754 A0A0U1RQJ8 604 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 C2CD4BA6NLJ0 364 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 I6L893 689 aaPredicted RBP14.66□□□□□ -0.06
TIMP1-205ENST00000456754 ARNTLO00327 626 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 GLI1P08151 1106 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 KRT3P12035 628 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 CORO1AP31146 461 aaKnown RBP14.66□□□□□ -0.06
TIMP1-205ENST00000456754 SCNN1AP37088 669 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 MATKP42679 507 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 SOX9P48436 509 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 SULT1E1P49888 294 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 GSCP56915 257 aaPredicted RBP14.66□□□□□ -0.06
TIMP1-205ENST00000456754 SNX16P57768 344 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 ZNF252P-AS1Q0IIN9 211 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 FCHO2Q0JRZ9 810 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 NME3Q13232 169 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 TDGQ13569 410 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 ZC3H12AQ5D1E8 599 aaKnown RBP14.66□□□□□ -0.06
TIMP1-205ENST00000456754 DAB2IPQ5VWQ8 1189 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 NAIF1Q69YI7 327 aaPredicted RBP14.66□□□□□ -0.06
TIMP1-205ENST00000456754 PLEKHA7Q6IQ23 1121 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 CPNE8Q86YQ8 564 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 DENND1CQ8IV53 801 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 ATRIPQ8WXE1 791 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 MYEOVQ96EZ4 313 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 BTBD6Q96KE9 485 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 NPY6RQ99463 290 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 DDX23Q9BUQ8 820 aaKnown RBP14.66□□□□□ -0.06
TIMP1-205ENST00000456754 TRMT61BQ9BVS5 477 aaKnown RBP14.66□□□□□ -0.06
TIMP1-205ENST00000456754 COL25A1Q9BXS0 654 aaPredicted RBP14.66□□□□□ -0.06
TIMP1-205ENST00000456754 EBF3Q9H4W6 596 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 FAM204AQ9H8W3 233 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 KIF9Q9HAQ2 790 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 OLA1Q9NTK5 396 aaKnown RBP14.66□□□□□ -0.06
TIMP1-205ENST00000456754 GTSE1Q9NYZ3 720 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 ZMYM5Q9UJ78 669 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 STRIP2Q9ULQ0 834 aa14.66□□□□□ -0.06
TIMP1-205ENST00000456754 REXO2Q9Y3B8 237 aaKnown RBP14.66□□□□□ -0.06
TIMP1-205ENST00000456754 GOLGA6L7A0A1B0GV03 622 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 SIGLEC16A6NMB1 481 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 M0QYT0 321 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 TRDMT1O14717 391 aaKnown RBP14.65□□□□□ -0.06
TIMP1-205ENST00000456754 IRAK2O43187 625 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 IGLV3-27P01718 113 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 TCF3P15923 654 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 NOS2P35228 1153 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 TBX4P57082 545 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 ATP11AP98196 1134 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 EIF4EBP2Q13542 120 aaPredicted RBP14.65□□□□□ -0.06
TIMP1-205ENST00000456754 TRIP4Q15650 581 aaPredicted RBP14.65□□□□□ -0.06
TIMP1-205ENST00000456754 CDO1Q16878 200 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 Q6ZNB5 142 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 BEND5Q7L4P6 421 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 ACRBPQ8NEB7 543 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 CDK5RAP1Q96SZ6 601 aaKnown RBP14.65□□□□□ -0.06
TIMP1-205ENST00000456754 BAG1Q99933 345 aaPredicted RBP14.65□□□□□ -0.06
TIMP1-205ENST00000456754 FAM83CQ9BQN1 747 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 MAGEB5Q9BZ81 275 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 PIGVQ9NUD9 493 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 DDIT4Q9NX09 232 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 DUS2Q9NX74 493 aaKnown RBP14.65□□□□□ -0.06
TIMP1-205ENST00000456754 OBP2AQ9NY56 170 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 WDR35Q9P2L0 1181 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 SH3BP1Q9Y3L3 701 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 SNX10Q9Y5X0 201 aa14.65□□□□□ -0.06
TIMP1-205ENST00000456754 A0A0C4DFX4 3053 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms