RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 PTPRN2Q92932 1015 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 UTP4Q969X6 686 aaKnown RBP20.79■□□□□ 0.92
CSPG5-203ENST00000456150 MTBPQ96DY7 904 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 STAMBPL1Q96FJ0 436 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 ZNF560Q96MR9 790 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 QKIQ96PU8 341 aaKnown RBP eCLIP20.79■□□□□ 0.92
CSPG5-203ENST00000456150 TUBB6Q9BUF5 446 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 FAM49AQ9H0Q0 323 aaPredicted RBP20.79■□□□□ 0.92
CSPG5-203ENST00000456150 DPEP3Q9H4B8 488 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 SETD4Q9NVD3 440 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 GTF2IRD1Q9UHL9 959 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 DCTN4Q9UJW0 460 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 L3MBTL1Q9Y468 752 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 MANSC4A6NHS7 340 aaPredicted RBP20.79■□□□□ 0.92
CSPG5-203ENST00000456150 KLF11O14901 512 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 CAPN15O75808 1086 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 RPL34P49207 117 aaKnown RBP20.79■□□□□ 0.92
CSPG5-203ENST00000456150 OVGP1Q12889 678 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 PLEKHG4Q58EX7 1191 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 FBXO47Q5MNV8 452 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 ALKAL1Q6UXT8 129 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 CLNKQ7Z7G1 428 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 MTDHQ86UE4 582 aaKnown RBP20.79■□□□□ 0.92
CSPG5-203ENST00000456150 CRYBG2Q8N1P7 616 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 RFWD2Q8NHY2 731 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 SRPK1Q96SB4 655 aaKnown RBP20.79■□□□□ 0.92
CSPG5-203ENST00000456150 ZIC5Q96T25 663 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 XAB2Q9HCS7 855 aaKnown RBP20.79■□□□□ 0.92
CSPG5-203ENST00000456150 ALG13Q9NP73 1137 aaKnown RBP20.79■□□□□ 0.92
CSPG5-203ENST00000456150 LNPEPQ9UIQ6 1025 aa20.79■□□□□ 0.92
CSPG5-203ENST00000456150 ABT1Q9ULW3 272 aaKnown RBP20.79■□□□□ 0.92
CSPG5-203ENST00000456150 MTO1Q9Y2Z2 717 aaKnown RBP20.79■□□□□ 0.92
CSPG5-203ENST00000456150 GPR32O75388 356 aa20.78■□□□□ 0.92
CSPG5-203ENST00000456150 KRT38O76015 456 aa20.78■□□□□ 0.92
CSPG5-203ENST00000456150 RECQL4O94761 1208 aa20.78■□□□□ 0.92
CSPG5-203ENST00000456150 TFE3P19532 575 aaPredicted RBP20.78■□□□□ 0.92
CSPG5-203ENST00000456150 ADORA2BP29275 332 aa20.78■□□□□ 0.92
CSPG5-203ENST00000456150 SERPINB4P48594 390 aa20.78■□□□□ 0.92
CSPG5-203ENST00000456150 ARFIP2P53365 341 aa20.78■□□□□ 0.92
CSPG5-203ENST00000456150 GBE1Q04446 702 aa20.78■□□□□ 0.92
CSPG5-203ENST00000456150 TMEM62Q0P6H9 643 aa20.78■□□□□ 0.92
CSPG5-203ENST00000456150 FAM110CQ1W6H9 321 aa20.78■□□□□ 0.92
CSPG5-203ENST00000456150 GLRA4Q5JXX5 417 aa20.78■□□□□ 0.92
CSPG5-203ENST00000456150 GPR142Q7Z601 462 aa20.78■□□□□ 0.92
CSPG5-203ENST00000456150 GSDMBQ8TAX9 411 aa20.78■□□□□ 0.92
CSPG5-203ENST00000456150 SLC7A6OSQ96CW6 309 aaPredicted RBP20.78■□□□□ 0.92
CSPG5-203ENST00000456150 HSFY1Q96LI6 401 aa20.78■□□□□ 0.92
CSPG5-203ENST00000456150 ABHD16BQ9H3Z7 469 aa20.78■□□□□ 0.92
CSPG5-203ENST00000456150 MKS1Q9NXB0 559 aa20.78■□□□□ 0.92
CSPG5-203ENST00000456150 A0A0G2JND7 137 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 XPOTO43592 962 aaKnown RBP20.77■□□□□ 0.92
CSPG5-203ENST00000456150 ANP32DO95626 131 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 LCP1P13796 627 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 CCDC130P13994 396 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 AXLP30530 894 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 GNL1P36915 607 aaPredicted RBP20.77■□□□□ 0.92
CSPG5-203ENST00000456150 PNPLA4P41247 253 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 SARNPP82979 210 aaKnown RBP20.77■□□□□ 0.92
CSPG5-203ENST00000456150 HEATR6Q6AI08 1181 aaKnown RBP20.77■□□□□ 0.92
CSPG5-203ENST00000456150 IQSEC1Q6DN90 963 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 UNC5AQ6ZN44 842 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 BZW1Q7L1Q6 419 aaKnown RBP20.77■□□□□ 0.92
CSPG5-203ENST00000456150 STRADAQ7RTN6 431 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 CLEC4CQ8WTT0 213 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 CSPG4P5Q96PW8 444 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 EBNA1BP2Q99848 306 aaKnown RBP20.77■□□□□ 0.92
CSPG5-203ENST00000456150 SNX25Q9H3E2 840 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 PRDM16Q9HAZ2 1276 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.77■□□□□ 0.92
CSPG5-203ENST00000456150 KANSL3Q9P2N6 904 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 HES2Q9Y543 173 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 CXorf49A8MYA2 514 aaPredicted RBP20.77■□□□□ 0.92
CSPG5-203ENST00000456150 HACD1B0YJ81 288 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 CBX6O95503 412 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 BGNP21810 368 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 PTPN4P29074 926 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 CCNFP41002 786 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 KCNT2Q6UVM3 1135 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 SMC1BQ8NDV3 1235 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 KBTBD7Q8WVZ9 684 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 MAML3Q96JK9 1138 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 KCTD15Q96SI1 283 aaPredicted RBP20.77■□□□□ 0.92
CSPG5-203ENST00000456150 TSPAN18Q96SJ8 248 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 TBC1D10AQ9BXI6 508 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 NXF3Q9H4D5 531 aaKnown RBP20.77■□□□□ 0.92
CSPG5-203ENST00000456150 MTMR10Q9NXD2 777 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 C15orf41Q9Y2V0 281 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 MAD1L1Q9Y6D9 718 aa20.77■□□□□ 0.92
CSPG5-203ENST00000456150 KPNA7A9QM74 516 aa20.76■□□□□ 0.91
CSPG5-203ENST00000456150 PIRO00625 290 aa20.76■□□□□ 0.91
CSPG5-203ENST00000456150 HAUS5O94927 633 aa20.76■□□□□ 0.91
CSPG5-203ENST00000456150 METTL18O95568 372 aa20.76■□□□□ 0.91
CSPG5-203ENST00000456150 DARSP14868 501 aaKnown RBP20.76■□□□□ 0.91
CSPG5-203ENST00000456150 IBSPP21815 317 aaPredicted RBP20.76■□□□□ 0.91
CSPG5-203ENST00000456150 ARL4AP40617 200 aa20.76■□□□□ 0.91
CSPG5-203ENST00000456150 SERPINB9P50453 376 aa20.76■□□□□ 0.91
CSPG5-203ENST00000456150 SLC10A2Q12908 348 aaPredicted RBP20.76■□□□□ 0.91
CSPG5-203ENST00000456150 SEMA5AQ13591 1074 aa20.76■□□□□ 0.91
CSPG5-203ENST00000456150 TAF1CQ15572 869 aaPredicted RBP20.76■□□□□ 0.91
CSPG5-203ENST00000456150 EFHC1Q5JVL4 640 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms