RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 PPARDQ03181 441 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 SOX4Q06945 474 aaPredicted RBP11.16□□□□□ -0.62
PKP4-206ENST00000452162 MORF4L2Q15014 288 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 CCDC14Q49A88 953 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 RNASEH2BQ5TBB1 312 aaKnown RBP11.16□□□□□ -0.62
PKP4-206ENST00000452162 SRLQ86TD4 932 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 MDM1Q8TC05 714 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 SPPL3Q8TCT6 385 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 ZNF473Q8WTR7 871 aaKnown RBP11.16□□□□□ -0.62
PKP4-206ENST00000452162 ZNF560Q96MR9 790 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 PPP1R10Q96QC0 940 aaKnown RBP11.16□□□□□ -0.62
PKP4-206ENST00000452162 CCT8L2Q96SF2 557 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 LPIN3Q9BQK8 851 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 SHOC2Q9UQ13 582 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 XIRP2A4UGR9 3374 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 CASTOR2A6NHX0 329 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 APOC4-APOC2K7ER74 178 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 NRP1O14786 923 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 PAPSS1O43252 624 aaPredicted RBP11.16□□□□□ -0.62
PKP4-206ENST00000452162 XPOTO43592 962 aaKnown RBP11.16□□□□□ -0.62
PKP4-206ENST00000452162 GRAP2O75791 330 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 FAM107AO95990 144 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 APOC2P02655 101 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 ABHD2P08910 425 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 PECAM1P16284 738 aaPredicted RBP11.16□□□□□ -0.62
PKP4-206ENST00000452162 IGFBP4P22692 258 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 DNAJB1P25685 340 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 PNPLA4P41247 253 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 MAGEA4P43358 317 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 SLC6A3Q01959 620 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 PLCB3Q01970 1234 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 CAMK1Q14012 370 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 RFX6Q8HWS3 928 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 CRYBG2Q8N1P7 616 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 SLC39A11Q8N1S5 342 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 BCL7CQ8WUZ0 217 aaPredicted RBP11.16□□□□□ -0.62
PKP4-206ENST00000452162 RBM15Q96T37 977 aaKnown RBP eCLIP11.16□□□□□ -0.623e-7■■■■□ 21.1
PKP4-206ENST00000452162 GAS2L1Q99501 681 aaPredicted RBP11.16□□□□□ -0.62
PKP4-206ENST00000452162 GOLGA2P5Q9HBQ8 144 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 PPANQ9NQ55 473 aaKnown RBP11.16□□□□□ -0.62
PKP4-206ENST00000452162 HESX1Q9UBX0 185 aa11.16□□□□□ -0.62
PKP4-206ENST00000452162 PRG3Q9Y2Y8 225 aaPredicted RBP11.16□□□□□ -0.62
PKP4-206ENST00000452162 RRP15Q9Y3B9 282 aaKnown RBP11.16□□□□□ -0.62
PKP4-206ENST00000452162 GMNCA6NCL1 334 aa11.15□□□□□ -0.62
PKP4-206ENST00000452162 A8MXQ7 604 aa11.15□□□□□ -0.62
PKP4-206ENST00000452162 KPNA7A9QM74 516 aa11.15□□□□□ -0.62
PKP4-206ENST00000452162 E7EVH7 732 aa11.15□□□□□ -0.62
PKP4-206ENST00000452162 EBAG9O00559 213 aa11.15□□□□□ -0.62
PKP4-206ENST00000452162 NDC80O14777 642 aa11.15□□□□□ -0.62
PKP4-206ENST00000452162 ALDH2P05091 517 aa11.15□□□□□ -0.62
PKP4-206ENST00000452162 OR1G1P47890 313 aa11.15□□□□□ -0.62
PKP4-206ENST00000452162 RPL34P49207 117 aaKnown RBP11.15□□□□□ -0.62
PKP4-206ENST00000452162 CDR1P51861 262 aa11.15□□□□□ -0.62
PKP4-206ENST00000452162 GDF10P55107 478 aa11.15□□□□□ -0.62
PKP4-206ENST00000452162 MMRN1Q13201 1228 aa11.15□□□□□ -0.62
PKP4-206ENST00000452162 ERMARDQ5T6L9 678 aa11.15□□□□□ -0.62
PKP4-206ENST00000452162 PRCCQ92733 491 aaPredicted RBP11.15□□□□□ -0.62
PKP4-206ENST00000452162 C9orf72Q96LT7 481 aa11.15□□□□□ -0.62
PKP4-206ENST00000452162 CFAP57Q96MR6 1250 aa11.15□□□□□ -0.62
PKP4-206ENST00000452162 XPO6Q96QU8 1125 aaKnown RBP11.15□□□□□ -0.62
PKP4-206ENST00000452162 TMEM175Q9BSA9 504 aa11.15□□□□□ -0.62
PKP4-206ENST00000452162 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.15□□□□□ -0.62
PKP4-206ENST00000452162 SPG21Q9NZD8 308 aa11.15□□□□□ -0.62
PKP4-206ENST00000452162 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
PKP4-206ENST00000452162 PRPSAP2O60256 369 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 CCDC130P13994 396 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 FOSL2P15408 326 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 CHN1P15882 459 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 IGFBP6P24592 240 aaPredicted RBP11.14□□□□□ -0.63
PKP4-206ENST00000452162 TAF6P49848 677 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 TUSC3Q13454 348 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 DPYSL3Q14195 570 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 EXOC3L1Q86VI1 746 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 ZDHHC17Q8IUH5 632 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 ANKRD52Q8NB46 1076 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 POF1BQ8WVV4 589 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 TEKT4Q8WW24 435 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 ATXN2LQ8WWM7 1075 aaKnown RBP11.14□□□□□ -0.63
PKP4-206ENST00000452162 IGSF21Q96ID5 467 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 SELENOSQ9BQE4 189 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 CALN1Q9BXU9 219 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 C10orf88Q9H8K7 445 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 SAYSD1Q9NPB0 183 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 MARCH5Q9NX47 278 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 LGALS13Q9UHV8 139 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 MTCH2Q9Y6C9 303 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 IFNB1P01574 187 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 LMO2P25791 158 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 GNL1P36915 607 aaPredicted RBP11.14□□□□□ -0.63
PKP4-206ENST00000452162 SCNN1AP37088 669 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 BCAT1P54687 386 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 CDH6P55285 790 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 SNX16P57768 344 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 EIF3EP60228 445 aaKnown RBP11.14□□□□□ -0.63
PKP4-206ENST00000452162 BST2Q10589 180 aaKnown RBP11.14□□□□□ -0.63
PKP4-206ENST00000452162 STAT4Q14765 748 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 CDO1Q16878 200 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 SV2CQ496J9 727 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 UNC45BQ8IWX7 931 aa11.14□□□□□ -0.63
PKP4-206ENST00000452162 SCUBE3Q8IX30 993 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms