RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 GATAD2AQ86YP4 633 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 SVOPQ8N4V2 548 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 SCFD1Q8WVM8 642 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 SKA1Q96BD8 255 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 ACOX2Q99424 681 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 ELF4Q99607 663 aaPredicted RBP8.42□□□□□ -1.06
LINC01961-201ENST00000449954 TARS2Q9BW92 718 aaKnown RBP8.42□□□□□ -1.06
LINC01961-201ENST00000449954 SLC26A6Q9BXS9 759 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 GPAMQ9HCL2 828 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 PCDHA12Q9UN75 941 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.42□□□□□ -1.06
LINC01961-201ENST00000449954 PCDHB1Q9Y5F3 818 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 RAD54BQ9Y620 910 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 OTOGQ6ZRI0 2925 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 TTC26A0AVF1 554 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 ARHGEF35A5YM69 484 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 KCNK3O14649 394 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 NPC1O15118 1278 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 TOM1L1O75674 476 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 OLFM2O95897 454 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 CLTAP09496 248 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 CXCL8P10145 99 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 GSPT1P15170 499 aaKnown RBP8.41□□□□□ -1.06
LINC01961-201ENST00000449954 ACP1P24666 158 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 CD27P26842 260 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 GRIK1P39086 918 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 PPP3CCP48454 512 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 CDR1P51861 262 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 GDF10P55107 478 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 TLR1Q15399 786 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 NTRK3Q16288 839 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 DDR2Q16832 855 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 TTC22Q5TAA0 569 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 SDHAF4Q5VUM1 108 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 ZNF385CQ66K41 422 aaPredicted RBP8.41□□□□□ -1.06
LINC01961-201ENST00000449954 EID2Q8N6I1 236 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 NAT16Q8N8M0 369 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.41□□□□□ -1.06
LINC01961-201ENST00000449954 SAP25Q8TEE9 199 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 PRCCQ92733 491 aaPredicted RBP8.41□□□□□ -1.06
LINC01961-201ENST00000449954 SIPA1Q96FS4 1042 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 CEP295NLQ96MC4 621 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 TCEANC2Q96MN5 208 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 DEPDC7Q96QD5 511 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 CCNL2Q96S94 520 aaPredicted RBP8.41□□□□□ -1.06
LINC01961-201ENST00000449954 DUSP9Q99956 384 aaKnown RBP8.41□□□□□ -1.06
LINC01961-201ENST00000449954 ACE2Q9BYF1 805 aaPredicted RBP8.41□□□□□ -1.06
LINC01961-201ENST00000449954 MKRN2Q9H000 416 aaKnown RBP8.41□□□□□ -1.06
LINC01961-201ENST00000449954 NUCKS1Q9H1E3 243 aaKnown RBP8.41□□□□□ -1.06
LINC01961-201ENST00000449954 ALG2Q9H553 416 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 TUFT1Q9NNX1 390 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 TRPM5Q9NZQ8 1165 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 CFAP97Q9P2B7 532 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 CPQQ9Y646 472 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 SLCO1B1Q9Y6L6 691 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 CELSR2Q9HCU4 2923 aa8.41□□□□□ -1.06
LINC01961-201ENST00000449954 TP53BP1Q12888 1972 aaPredicted RBP8.41□□□□□ -1.06
LINC01961-201ENST00000449954 PPEF2O14830 753 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 VILLO15195 856 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 USP12O75317 370 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 EPHA8P29322 1005 aaPredicted RBP8.4□□□□□ -1.06
LINC01961-201ENST00000449954 ARRB1P49407 418 aaPredicted RBP8.4□□□□□ -1.06
LINC01961-201ENST00000449954 MYL7Q01449 175 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 SPAG1Q07617 926 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 ST3GAL1Q11201 340 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 NECTIN1Q15223 517 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 E2F5Q15329 346 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 NPY5RQ15761 445 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 KYAT1Q16773 422 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 CFAP221Q4G0U5 840 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 SPATA1Q5VX52 437 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 CRYBG3Q68DQ2 2970 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 HIST2H2BCQ6DN03 193 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 LAYNQ6UX15 382 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 TICAM1Q8IUC6 712 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 SPATA20Q8TB22 786 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 EXTL1Q92935 676 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 ERLEC1Q96DZ1 483 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 CCSER1Q9C0I3 900 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 LSG1Q9H089 658 aaKnown RBP8.4□□□□□ -1.06
LINC01961-201ENST00000449954 SLC25A18Q9H1K4 315 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 EPN3Q9H201 632 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 SPHK2Q9NRA0 654 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 DNAJC17Q9NVM6 304 aaKnown RBP8.4□□□□□ -1.06
LINC01961-201ENST00000449954 SMPD4Q9NXE4 827 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 EHD2Q9NZN4 543 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 ARHGAP28Q9P2N2 729 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 TJP2Q9UDY2 1190 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 ATXN7L1Q9ULK2 861 aaPredicted RBP8.4□□□□□ -1.06
LINC01961-201ENST00000449954 RBM19Q9Y4C8 960 aaKnown RBP8.4□□□□□ -1.06
LINC01961-201ENST00000449954 MYOFQ9NZM1 2061 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 NF1P21359 2839 aa8.4□□□□□ -1.06
LINC01961-201ENST00000449954 SPENQ96T58 3664 aaKnown RBP8.4□□□□□ -1.07
LINC01961-201ENST00000449954 CYB561D2O14569 222 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 SCAMP3O14828 347 aaKnown RBP8.39□□□□□ -1.07
LINC01961-201ENST00000449954 CACNG3O60359 315 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 SYNCRIPO60506 623 aaKnown RBP8.39□□□□□ -1.07
LINC01961-201ENST00000449954 HMGB1P09429 215 aaKnown RBP8.39□□□□□ -1.07
LINC01961-201ENST00000449954 FAM87AP0C7U9 286 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 CYP2F1P24903 491 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms