RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 GNPTABQ3T906 1256 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 SPDYCQ5MJ68 293 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 STXBP5Q5T5C0 1151 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 TRIM68Q6AZZ1 485 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 KDM7AQ6ZMT4 941 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 PDZD4Q76G19 769 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-205ENST00000447267 RABEPKQ7Z6M1 372 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 NAT16Q8N8M0 369 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 ADCY4Q8NFM4 1077 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 SMARCC2Q8TAQ2 1214 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 LNX1Q8TBB1 728 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-205ENST00000447267 ZNF564Q8TBZ8 553 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-205ENST00000447267 HMGB4Q8WW32 186 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 MIB2Q96AX9 1013 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 VCPIP1Q96JH7 1222 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 ZNF578Q96N58 590 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-205ENST00000447267 INPP4AQ96PE3 977 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-205ENST00000447267 AMNQ9BXJ7 453 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 UNKQ9C0B0 810 aaKnown RBP5.55□□□□□ -1.52
SDCBP-205ENST00000447267 KLHL25Q9H0H3 589 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 VAT1LQ9HCJ6 419 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 GKN1Q9NS71 199 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 MIOSQ9NXC5 875 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 BCCIPQ9P287 314 aaKnown RBP eCLIP5.55□□□□□ -1.52
SDCBP-205ENST00000447267 CACNG4Q9UBN1 327 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 EFR3BQ9Y2G0 817 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 MRPL11Q9Y3B7 192 aaKnown RBP5.55□□□□□ -1.52
SDCBP-205ENST00000447267 PCDHB1Q9Y5F3 818 aa5.55□□□□□ -1.52
SDCBP-205ENST00000447267 PI4KAP42356 2102 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 UBE4BO95155 1302 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 ZNF197O14709 1029 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 FFAR3O14843 346 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 AP5Z1O43299 807 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 BUB1BO60566 1050 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-205ENST00000447267 PLA2G1BP04054 148 aaKnown RBP5.54□□□□□ -1.52
SDCBP-205ENST00000447267 PDHBP11177 359 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 ATF2P15336 505 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 GNLYP22749 145 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 MAPKAPK2P49137 400 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 CLCN3P51790 818 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 ZNF543Q08ER8 600 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 TTF1Q15361 905 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-205ENST00000447267 PSMD5Q16401 504 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 TBR1Q16650 682 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 QRICH1Q2TAL8 776 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 ARHGAP29Q52LW3 1261 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 HLA-DQA1Q5Y7H0 255 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 TWF2Q6IBS0 349 aaKnown RBP5.54□□□□□ -1.52
SDCBP-205ENST00000447267 TRMT1LQ7Z2T5 733 aaKnown RBP5.54□□□□□ -1.52
SDCBP-205ENST00000447267 HAUS6Q7Z4H7 955 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 HOMEZQ8IX15 550 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 SPATA3Q8NHX4 192 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 PDCD6IPQ8WUM4 868 aaKnown RBP5.54□□□□□ -1.52
SDCBP-205ENST00000447267 RELTQ969Z4 430 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 P2RY13Q9BPV8 354 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 TMEM47Q9BQJ4 181 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 DACT1Q9NYF0 836 aa5.54□□□□□ -1.52
SDCBP-205ENST00000447267 HELZP42694 1942 aaKnown RBP5.53□□□□□ -1.52
SDCBP-205ENST00000447267 A0A1W2PQH9 124 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 KRT7P08729 469 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 IFIT2P09913 472 aaKnown RBP5.53□□□□□ -1.52
SDCBP-205ENST00000447267 ZNF883P0CG24 379 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 SFTPCP11686 197 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 ARSAP15289 507 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 DRD1P21728 446 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 MATKP42679 507 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 GIPRP48546 466 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 STAT5BP51692 787 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 IL9RQ01113 521 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 SRSF6Q13247 344 aaKnown RBP5.53□□□□□ -1.52
SDCBP-205ENST00000447267 SF3A1Q15459 793 aaKnown RBP5.53□□□□□ -1.52
SDCBP-205ENST00000447267 TESK1Q15569 626 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 CRY1Q16526 586 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 VWA3BQ502W6 1294 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 CYP4A22Q5TCH4 519 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 LMBRD2Q68DH5 695 aaPredicted RBP5.53□□□□□ -1.52
SDCBP-205ENST00000447267 USP53Q70EK8 1073 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 TMEM151BQ8IW70 566 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 ADGRF4Q8IZF3 695 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 ADGRG2Q8IZP9 1017 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 USP33Q8TEY7 942 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 HASPINQ8TF76 798 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 E2F7Q96AV8 911 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 ERLEC1Q96DZ1 483 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 PWWP2AQ96N64 755 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 STRBPQ96SI9 672 aaKnown RBP5.53□□□□□ -1.52
SDCBP-205ENST00000447267 SENP7Q9BQF6 1050 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 POLR3CQ9BUI4 534 aaPredicted RBP5.53□□□□□ -1.52
SDCBP-205ENST00000447267 COLEC11Q9BWP8 271 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 MAF1Q9H063 256 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 EBF3Q9H4W6 596 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 AZI2Q9H6S1 392 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 ZNF287Q9HBT7 754 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 ZDHHC4Q9NPG8 344 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 HPS4Q9NQG7 708 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 FTSJ1Q9UET6 329 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 AKT3Q9Y243 479 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 AKAP9Q99996 3911 aa5.53□□□□□ -1.52
SDCBP-205ENST00000447267 MN1Q10571 1320 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-205ENST00000447267 DOCK5Q9H7D0 1870 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms