RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 SERPINB8P50452 374 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 MLLT6P55198 1093 aaPredicted RBP10.93□□□□□ -0.66
SYNE2-206ENST00000441438 YWHAZP63104 245 aaKnown RBP10.93□□□□□ -0.66
SYNE2-206ENST00000441438 EEF1A1P68104 462 aaKnown RBP10.93□□□□□ -0.66
SYNE2-206ENST00000441438 EEF1A2Q05639 463 aaKnown RBP10.93□□□□□ -0.66
SYNE2-206ENST00000441438 CYP2A13Q16696 494 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 EEF1A1P5Q5VTE0 462 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 CMIPQ8IY22 773 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 THNSL1Q8IYQ7 743 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 ANKRD44Q8N8A2 993 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 SCFD2Q8WU76 684 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 LRRC39Q96DD0 335 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 FAM114A2Q9NRY5 505 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 TOR4AQ9NXH8 423 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 AFF4Q9UHB7 1163 aaKnown RBP10.93□□□□□ -0.66
SYNE2-206ENST00000441438 RPAP1Q9BWH6 1393 aaPredicted RBP10.93□□□□□ -0.66
SYNE2-206ENST00000441438 DVL2O14641 736 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 WDR46O15213 610 aaKnown RBP10.93□□□□□ -0.66
SYNE2-206ENST00000441438 IDH3BO43837 385 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 PPM1BO75688 479 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 CRTAPO75718 401 aaPredicted RBP10.93□□□□□ -0.66
SYNE2-206ENST00000441438 GJB1P08034 283 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 CTSSP25774 331 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 HNRNPH1P31943 449 aaKnown RBP10.93□□□□□ -0.66
SYNE2-206ENST00000441438 CASP9P55211 416 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 XRCC4Q13426 336 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 CDONQ4KMG0 1287 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 WLSQ5T9L3 541 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 KRT25Q7Z3Z0 450 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 MICU3Q86XE3 530 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 ZFPM1Q8IX07 1006 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 C1orf162Q8NEQ5 155 aaPredicted RBP10.93□□□□□ -0.66
SYNE2-206ENST00000441438 USP7Q93009 1102 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 MED30Q96HR3 178 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 NUP88Q99567 741 aaPredicted RBP10.93□□□□□ -0.66
SYNE2-206ENST00000441438 FUCA2Q9BTY2 467 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 DPH5Q9H2P9 285 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 SEMA6BQ9H3T3 888 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 PHAXQ9H814 394 aaKnown RBP10.93□□□□□ -0.66
SYNE2-206ENST00000441438 ZMAT3Q9HA38 289 aaKnown RBP10.93□□□□□ -0.66
SYNE2-206ENST00000441438 TUFT1Q9NNX1 390 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 CYTH4Q9UIA0 394 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 PCDH11XQ9BZA7 1347 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 PCDH11YQ9BZA8 1340 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 WDR33Q9C0J8 1336 aaKnown RBP10.92□□□□□ -0.66
SYNE2-206ENST00000441438 C4BP0C0L5 1744 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 SCAMP1O15126 338 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 FGFR1P11362 822 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 CPB1P15086 417 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 PDE6AP16499 860 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 STARP49675 285 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 GSDMDP57764 484 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 NNTQ13423 1086 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 RAPSNQ13702 412 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 TJAP1Q5JTD0 557 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 MAML2Q8IZL2 1156 aaPredicted RBP10.92□□□□□ -0.66
SYNE2-206ENST00000441438 KCNG4Q8TDN1 519 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 SLC39A7Q92504 469 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 WRNIP1Q96S55 665 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 HSD3B7Q9H2F3 369 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 WDR26Q9H7D7 661 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 ARHGEF38Q9NXL2 777 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 WWOXQ9NZC7 414 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 CRNNQ9UBG3 495 aaPredicted RBP10.92□□□□□ -0.66
SYNE2-206ENST00000441438 CD300AQ9UGN4 299 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 ASIC3Q9UHC3 531 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 IPO11Q9UI26 975 aaKnown RBP10.92□□□□□ -0.66
SYNE2-206ENST00000441438 SOX13Q9UN79 622 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 NAALADL1Q9UQQ1 740 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 CLDN16Q9Y5I7 305 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 SERTM2A0A1B0GWG4 89 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 A4D1N5 150 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 GCATO75600 419 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 TMIGD3P0DMS9 266 aaPredicted RBP10.92□□□□□ -0.66
SYNE2-206ENST00000441438 CALM1P0DP23 149 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 CALM2P0DP24 149 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 CALM3P0DP25 149 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 PEX2P28328 305 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 ADSSP30520 456 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 RFC2P35250 354 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 GATMP50440 423 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 ITGA8P53708 1063 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 ATP8B2P98198 1209 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 PLOD1Q02809 727 aaPredicted RBP10.92□□□□□ -0.66
SYNE2-206ENST00000441438 RPA4Q13156 261 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 LPIN1Q14693 890 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 EZH2Q15910 746 aaKnown RBP10.92□□□□□ -0.66
SYNE2-206ENST00000441438 C2orf76Q3KRA6 126 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 FOXR2Q6PJQ5 311 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 KSR1Q8IVT5 923 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 SLC43A2Q8N370 569 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 TTLQ8NG68 377 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 SPATA20Q8TB22 786 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 LMBR1Q8WVP7 490 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 GPR62Q9BZJ7 368 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 PNPLA8Q9NP80 782 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 SNX15Q9NRS6 342 aa10.92□□□□□ -0.66
SYNE2-206ENST00000441438 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.92□□□□□ -0.66
SYNE2-206ENST00000441438 C4AP0C0L4 1744 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 KIAA1551Q9HCM1 1747 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms