RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 SPATA5Q8NB90 893 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 ATG4AQ8WYN0 398 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 EID2BQ96D98 161 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 HIST1H2AAQ96QV6 131 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 CINPQ9BW66 212 aaPredicted RBP2.51□□□□□ -2.01
CDC40-204ENST00000431461 RNF26Q9BY78 433 aaPredicted RBP2.51□□□□□ -2.01
CDC40-204ENST00000431461 SLC25A32Q9H2D1 315 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 CHST12Q9NRB3 414 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 TMLHEQ9NVH6 421 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 RGL1Q9NZL6 768 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 GABRQQ9UN88 632 aa2.51□□□□□ -2.01
CDC40-204ENST00000431461 COL15A1P39059 1388 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 ARID4BQ4LE39 1312 aaPredicted RBP2.5□□□□□ -2.01
CDC40-204ENST00000431461 A1L4Q6 167 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 EFCAB8A8MWE9 144 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 BTBD19C9JJ37 291 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 F5H423 210 aaPredicted RBP2.5□□□□□ -2.01
CDC40-204ENST00000431461 H7C4K7 107 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 SYT5O00445 386 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 PODXLO00592 558 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 SOCS2O14508 198 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 TPD52L2O43399 206 aaKnown RBP2.5□□□□□ -2.01
CDC40-204ENST00000431461 PEX14O75381 377 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 LDHAP00338 332 aaKnown RBP2.5□□□□□ -2.01
CDC40-204ENST00000431461 ITGA2BP08514 1039 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 MATN1P21941 496 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 UQCRC1P31930 480 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 CCT5P48643 541 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 CDK7P50613 346 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 TIRAPP58753 221 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 TXNL4AP83876 142 aaKnown RBP2.5□□□□□ -2.01
CDC40-204ENST00000431461 HOXA4Q00056 320 aaPredicted RBP2.5□□□□□ -2.01
CDC40-204ENST00000431461 CHAF1AQ13111 956 aaPredicted RBP2.5□□□□□ -2.01
CDC40-204ENST00000431461 PMS2P11Q13670 270 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 ATP1A4Q13733 1029 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 CSHL1Q14406 222 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 MPEG1Q2M385 716 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 ZACNQ401N2 412 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 GLE1Q53GS7 698 aaKnown RBP2.5□□□□□ -2.01
CDC40-204ENST00000431461 IRF2BP2Q7Z5L9 587 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 MRPL10Q7Z7H8 261 aaKnown RBP2.5□□□□□ -2.01
CDC40-204ENST00000431461 LIX1LQ8IVB5 337 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 LRRC71Q8N4P6 559 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 NRACQ8N912 160 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 C8orf58Q8NAV2 365 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 ABHD11Q8NFV4 315 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 PARD3BQ8TEW8 1205 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 NSMCE1Q8WV22 266 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 MUL1Q969V5 352 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 KIAA1191Q96A73 305 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 GRAMD1AQ96CP6 724 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 HERPUD2Q9BSE4 406 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 PAGR1Q9BTK6 254 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 TTLL2Q9BWV7 592 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 WDR12Q9GZL7 423 aaKnown RBP2.5□□□□□ -2.01
CDC40-204ENST00000431461 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.5□□□□□ -2.01
CDC40-204ENST00000431461 SMOC2Q9H3U7 446 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 AGO4Q9HCK5 861 aaKnown RBP2.5□□□□□ -2.01
CDC40-204ENST00000431461 PDGFCQ9NRA1 345 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 TRNAU1APQ9NX07 287 aaKnown RBP2.5□□□□□ -2.01
CDC40-204ENST00000431461 SERTAD3Q9UJW9 196 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 CCNL1Q9UK58 526 aaPredicted RBP2.5□□□□□ -2.01
CDC40-204ENST00000431461 AMFRQ9UKV5 643 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 HPSEQ9Y251 543 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 DRG1Q9Y295 367 aaKnown RBP2.5□□□□□ -2.01
CDC40-204ENST00000431461 MAN2B2Q9Y2E5 1009 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 AFG3L2Q9Y4W6 797 aa2.5□□□□□ -2.01
CDC40-204ENST00000431461 TCF20Q9UGU0 1960 aaKnown RBP2.49□□□□□ -2.01
CDC40-204ENST00000431461 A0A087WV62 115 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 EME2A4GXA9 379 aaPredicted RBP2.49□□□□□ -2.01
CDC40-204ENST00000431461 TTC34A8MYJ7 566 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 F8W8V4 182 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 H0YIZ8 118 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 UBE2Q2LH0YL09 131 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 H7C1Q1 480 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 TCEA3O75764 348 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 BCAR3O75815 825 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 FGBP02675 491 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 CSF1RP07333 972 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 ITGA5P08648 1049 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 IL6RP08887 468 aaPredicted RBP2.49□□□□□ -2.01
CDC40-204ENST00000431461 TMEM225BP0DP42 221 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 HARSP12081 509 aaKnown RBP2.49□□□□□ -2.01
CDC40-204ENST00000431461 SCP2P22307 547 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 ADRA1DP25100 572 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 MST1P26927 711 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 GABRB3P28472 473 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 GKP32189 559 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 GRK6P43250 576 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 PDE1AP54750 535 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 ALDH18A1P54886 795 aaKnown RBP2.49□□□□□ -2.01
CDC40-204ENST00000431461 EEFSECP57772 596 aaKnown RBP2.49□□□□□ -2.01
CDC40-204ENST00000431461 EIF4A1P60842 406 aaKnown RBP2.49□□□□□ -2.01
CDC40-204ENST00000431461 PTK2BQ14289 1009 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 RAB30Q15771 203 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 TBRG1Q3YBR2 411 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 CERKLQ49MI3 558 aaPredicted RBP2.49□□□□□ -2.01
CDC40-204ENST00000431461 HSP90AB4PQ58FF6 505 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 TREML2Q5T2D2 321 aa2.49□□□□□ -2.01
CDC40-204ENST00000431461 DEPDC1Q5TB30 811 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms