RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 GRIA1P42261 906 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 SREBF2Q12772 1141 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 UBAP2LQ14157 1087 aaKnown RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 KIZQ2M2Z5 673 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 XRRA1Q6P2D8 792 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 BBS12Q6ZW61 710 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 CATSPER4Q7RTX7 472 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 PID1Q7Z2X4 250 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 SLC26A11Q86WA9 606 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 WDTC1Q8N5D0 677 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 C10orf82Q8WW14 230 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 SCG3Q8WXD2 468 aaKnown RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 NDRG1Q92597 394 aaKnown RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 CDKL2Q92772 493 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 MTBPQ96DY7 904 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 TSNARE1Q96NA8 513 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 BTBD10Q9BSF8 475 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 SEZ6LQ9BYH1 1024 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 MAGEB5Q9BZ81 275 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 ARHGAP39Q9C0H5 1083 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 ACTL7BQ9Y614 415 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 SNCAIPQ9Y6H5 919 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 RIPK1Q13546 671 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 OASLQ15646 514 aaKnown RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 TTC39BQ5VTQ0 682 aaPredicted RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 TRMT10BQ6PF06 316 aaKnown RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 FAM183BPQ6ZVS7 135 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 KIAA0319LQ8IZA0 1049 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.34□□□□□ -1.07
HPS4-205ENST00000429411 ZNF296Q8WUU4 475 aaPredicted RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 ALKBH8Q96BT7 664 aaKnown RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 OXNAD1Q96HP4 312 aaPredicted RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 FAM167AQ96KS9 214 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 MMP19Q99542 508 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 NT5C1AQ9BXI3 368 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 CDT1Q9H211 546 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 DCLRE1BQ9H816 532 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 PDGFCQ9NRA1 345 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 ZFATQ9P243 1243 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 PAK5Q9P286 719 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 KLHL8Q9P2G9 620 aaPredicted RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 CYTH4Q9UIA0 394 aa8.34□□□□□ -1.07
HPS4-205ENST00000429411 APOBEC2Q9Y235 224 aaKnown RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 DRG1Q9Y295 367 aaKnown RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 MTO1Q9Y2Z2 717 aaKnown RBP8.34□□□□□ -1.07
HPS4-205ENST00000429411 GOLGA8QA0A0J9YX86 632 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 GOLGA8OA6NCC3 632 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 CXorf49A8MYA2 514 aaPredicted RBP8.33□□□□□ -1.08
HPS4-205ENST00000429411 GOLGA8NF8WBI6 632 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 KCNK1O00180 336 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 SETSIPP0DME0 302 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 AMPD1P23109 780 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 AP3M2P53677 418 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 PEX6Q13608 980 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 CUL3Q13618 768 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 PLEKHG4Q58EX7 1191 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 RABGAP1LQ5R372 815 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 THEMIS2Q5TEJ8 643 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 FKBP1CQ5VVH2 108 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 DNAJC5GQ8N7S2 189 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 ADAM32Q8TC27 787 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 RAET1EQ8TD07 263 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 UTP4Q969X6 686 aaKnown RBP8.33□□□□□ -1.08
HPS4-205ENST00000429411 APOPT1Q96IL0 206 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 PGLYRP2Q96PD5 576 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 CADM1Q9BY67 442 aaKnown RBP8.33□□□□□ -1.08
HPS4-205ENST00000429411 ELOVL4Q9GZR5 314 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 WWP1Q9H0M0 922 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 C2orf40Q9H1Z8 148 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 LRMDAQ9H2I8 198 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 MINDY3Q9H8M7 445 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 UBP1Q9NZI7 540 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 DNAJC16Q9Y2G8 782 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 WASF2Q9Y6W5 498 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 CNTNAP2Q9UHC6 1331 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 WDR27A2RRH5 827 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 GPR25O00155 361 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 HCRTO43612 131 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 PEX11AO75192 247 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 FARP2O94887 1054 aaPredicted RBP8.33□□□□□ -1.08
HPS4-205ENST00000429411 GCAP28676 217 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 STIP1P31948 543 aaKnown RBP8.33□□□□□ -1.08
HPS4-205ENST00000429411 ARL2P36404 184 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 VHLP40337 213 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 MLH1P40692 756 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 SLC25A3Q00325 362 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 CDK16Q00536 496 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 GBE1Q04446 702 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 GALNTL6Q49A17 601 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 DCAF6Q58WW2 860 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 SLC45A4Q5BKX6 768 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 EFHC2Q5JST6 749 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 RNF148Q8N7C7 305 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 C1orf127Q8N9H9 656 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 USP33Q8TEY7 942 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 SH3TC2Q8TF17 1288 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 NKD2Q969F2 451 aaPredicted RBP8.33□□□□□ -1.08
HPS4-205ENST00000429411 CNPY3Q9BT09 278 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 ZFYVE28Q9HCC9 887 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 BATF3Q9NR55 127 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms