RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 WDR49Q8IV35 697 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 WDR75Q8IWA0 830 aaKnown RBP12.91□□□□□ -0.34
CDH3-202ENST00000429102 TP53INP2Q8IXH6 220 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 SNX31Q8N9S9 440 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 SLC4A11Q8NBS3 891 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 ACO2Q99798 780 aaKnown RBP12.91□□□□□ -0.34
CDH3-202ENST00000429102 RSAD1Q9HA92 442 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 TEX264Q9Y6I9 313 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 A6NJR5 290 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 TPP1O14773 563 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 PEX2P28328 305 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 SDC4P31431 198 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 ARL2P36404 184 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 KCNT2Q6UVM3 1135 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 CAND1Q86VP6 1230 aaKnown RBP12.9□□□□□ -0.34
CDH3-202ENST00000429102 C10orf107Q8IVU9 208 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 FBXO16Q8IX29 292 aaPredicted RBP12.9□□□□□ -0.34
CDH3-202ENST00000429102 ENDOVQ8N8Q3 282 aaKnown RBP12.9□□□□□ -0.34
CDH3-202ENST00000429102 TMEM176AQ96HP8 235 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 HPDLQ96IR7 371 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 PCYT2Q99447 389 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 ANGPTL2Q9UKU9 493 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 MED7O43513 233 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 PEX1O43933 1283 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 MSCO60682 206 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 LYNP07948 512 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 HOXC6P09630 235 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 TPH1P17752 444 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 MGAT1P26572 445 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 PKNOX1P55347 436 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 DSG1Q02413 1049 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 GOLGA7BQ2TAP0 167 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 IRGCQ6NXR0 463 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 IYDQ6PHW0 289 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 PCDH19Q8TAB3 1148 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 SGF29Q96ES7 293 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 DNAJC1Q96KC8 554 aaKnown RBP12.9□□□□□ -0.34
CDH3-202ENST00000429102 SNRNP25Q9BV90 132 aaKnown RBP12.9□□□□□ -0.34
CDH3-202ENST00000429102 TAGLN3Q9UI15 199 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 LAMA3Q16787 3333 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 A0A087WZ62 844 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 SPATA31C2B4DYI2 1134 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 RNASEH1O60930 286 aaKnown RBP12.9□□□□□ -0.34
CDH3-202ENST00000429102 DNAJC6O75061 913 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 SNUPNO95149 360 aaKnown RBP12.9□□□□□ -0.34
CDH3-202ENST00000429102 MT-CO1P00395 513 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 GSTT1P30711 240 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 CCNFP41002 786 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 RTP1P59025 263 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 NME3Q13232 169 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.9□□□□□ -0.34
CDH3-202ENST00000429102 LRRC38Q5VT99 294 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 PMF1Q6P1K2 205 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 MAP7D3Q8IWC1 876 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 PNPLA1Q8N8W4 532 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 RNF157Q96PX1 679 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 PHF12Q96QT6 1004 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 GMLQ99445 158 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 FDXACB1Q9BRP7 624 aaPredicted RBP12.9□□□□□ -0.34
CDH3-202ENST00000429102 ARHGEF4Q9NR80 690 aa12.9□□□□□ -0.34
CDH3-202ENST00000429102 STX18Q9P2W9 335 aaKnown RBP12.9□□□□□ -0.34
CDH3-202ENST00000429102 COL24A1Q17RW2 1714 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 RFPL1O75677 317 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 APOEP02649 317 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 IQCF3P0C7M6 154 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 STAG3L1P0CL83 205 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 AVPR1AP37288 418 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 TFDP2Q14188 446 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 PAOXQ6QHF9 649 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 PHTF2Q8N3S3 785 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 DNAAF3Q8N9W5 541 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 FAM156AQ8NDB6 213 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 ABTB1Q969K4 478 aaPredicted RBP12.89□□□□□ -0.35
CDH3-202ENST00000429102 CDHR1Q96JP9 859 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 SPATA33Q96N06 139 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 XYLT2Q9H1B5 865 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 WDR55Q9H6Y2 383 aaPredicted RBP12.89□□□□□ -0.35
CDH3-202ENST00000429102 LNPEPQ9UIQ6 1025 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 SIX4Q9UIU6 781 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 APPL1Q9UKG1 709 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 ATAD5Q96QE3 1844 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 ARIH2O95376 493 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 AMHP03971 560 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 BAG6P46379 1132 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 GMPSP49915 693 aaPredicted RBP12.89□□□□□ -0.35
CDH3-202ENST00000429102 AQP4P55087 323 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 MMEL1Q495T6 779 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 DRICH1Q6PGQ1 229 aaPredicted RBP12.89□□□□□ -0.35
CDH3-202ENST00000429102 C10orf71Q711Q0 1435 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 ZNFX1Q9P2E3 1918 aaKnown RBP12.89□□□□□ -0.35
CDH3-202ENST00000429102 MAGEA13PA6NCF6 341 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 SLC15A5A6NIM6 579 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 LSM8O95777 96 aaKnown RBP12.89□□□□□ -0.35
CDH3-202ENST00000429102 PTPRAP18433 802 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 CYP2F1P24903 491 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 SLC1A6P48664 564 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 ZNF132P52740 706 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 CDC16Q13042 620 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 SFT2D3Q587I9 215 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 PPP1R26Q5T8A7 1209 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms