RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 EMBQ6PCB8 327 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 CCDC137Q6PK04 289 aaKnown RBP9.43□□□□□ -0.9
NR1I3-209ENST00000428574 C4orf22Q6V702 233 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 CCDC149Q6ZUS6 474 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 SCD5Q86SK9 330 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 ITIH5Q86UX2 942 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 SCAMP5Q8TAC9 235 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 SLC35B2Q8TB61 432 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 SLC7A14Q8TBB6 771 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 DQX1Q8TE96 717 aaKnown RBP9.43□□□□□ -0.9
NR1I3-209ENST00000428574 RNF139Q8WU17 664 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 HDAC7Q8WUI4 952 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 RNF25Q96BH1 459 aaPredicted RBP9.43□□□□□ -0.9
NR1I3-209ENST00000428574 RNF157Q96PX1 679 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 LRRC1Q9BTT6 524 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 AP1M1Q9BXS5 423 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 EMILIN2Q9BXX0 1053 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 DCLK3Q9C098 648 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 DDX47Q9H0S4 455 aaKnown RBP9.43□□□□□ -0.9
NR1I3-209ENST00000428574 TSPYL1Q9H0U9 437 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 OSBPL2Q9H1P3 480 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 FAM204AQ9H8W3 233 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 GDF3Q9NR23 364 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 FAM114A2Q9NRY5 505 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 DDIT4Q9NX09 232 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 DONSONQ9NYP3 566 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 SMARCAL1Q9NZC9 954 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 CXXC1Q9P0U4 656 aaPredicted RBP9.43□□□□□ -0.9
NR1I3-209ENST00000428574 PCSK1NQ9UHG2 260 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 DPP7Q9UHL4 492 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 TLR6Q9Y2C9 796 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 PTPRSQ13332 1948 aa9.43□□□□□ -0.9
NR1I3-209ENST00000428574 SLC38A8A6NNN8 435 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 SOBPA7XYQ1 873 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 SMAPO00193 183 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 APOL1O14791 398 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 NCAM2O15394 837 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 RAD51CO43502 376 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 LIASO43766 372 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 FGF19O95750 216 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 RHOXF2BP0C7M4 288 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 ATF6P18850 670 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 HOXA9P31269 272 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 HOXC13P31276 330 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 STIP1P31948 543 aaKnown RBP9.42□□□□□ -0.9
NR1I3-209ENST00000428574 CCR1P32246 355 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 ELF1P32519 619 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 GJC1P36383 396 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 ALDH1A3P47895 512 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 VCPP55072 806 aaKnown RBP9.42□□□□□ -0.9
NR1I3-209ENST00000428574 CAV1Q03135 178 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 DUSP4Q13115 394 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 PTK6Q13882 451 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 BYSLQ13895 437 aaKnown RBP9.42□□□□□ -0.9
NR1I3-209ENST00000428574 OASLQ15646 514 aaKnown RBP9.42□□□□□ -0.9
NR1I3-209ENST00000428574 SMTNL2Q2TAL5 461 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 ATP13A4Q4VNC1 1196 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 PABPC1LQ4VXU2 614 aaKnown RBP9.42□□□□□ -0.9
NR1I3-209ENST00000428574 SH3PXD2AQ5TCZ1 1133 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 DAB2IPQ5VWQ8 1189 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 DUPD1Q68J44 220 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 FAM117BQ6P1L5 589 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 SCYL2Q6P3W7 929 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 HFE2Q6ZVN8 426 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 PDZD4Q76G19 769 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-209ENST00000428574 TAC4Q86UU9 113 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 JAMLQ86YT9 394 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 CCDC105Q8IYK2 499 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 CCDC89Q8N998 374 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 BBOF1Q8ND07 529 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 STKLD1Q8NE28 680 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-209ENST00000428574 HSPH1Q92598 858 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 FBXO32Q969P5 355 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 HAUS1Q96CS2 278 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 B3GALT6Q96L58 329 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 C1orf74Q96LT6 269 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 PGLYRP2Q96PD5 576 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 SEPT5Q99719 369 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-209ENST00000428574 RHOXF2Q9BQY4 288 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 ERP44Q9BS26 406 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 CALN1Q9BXU9 219 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 MAK16Q9BXY0 300 aaKnown RBP9.42□□□□□ -0.9
NR1I3-209ENST00000428574 ADAM33Q9BZ11 813 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 FOXP3Q9BZS1 431 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 BRD8Q9H0E9 1235 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 WDCPQ9H6R7 721 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 ARFGAP3Q9NP61 516 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 PIGVQ9NUD9 493 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.42□□□□□ -0.9
NR1I3-209ENST00000428574 MTMR10Q9NXD2 777 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 ARHGEF38Q9NXL2 777 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.42□□□□□ -0.9
NR1I3-209ENST00000428574 AMACRQ9UHK6 382 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 NAALADL1Q9UQQ1 740 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 HBS1LQ9Y450 684 aaKnown RBP9.42□□□□□ -0.9
NR1I3-209ENST00000428574 YIPF1Q9Y548 306 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 PCDHA11Q9Y5I1 949 aa9.42□□□□□ -0.9
NR1I3-209ENST00000428574 KIAA1671Q9BY89 1806 aa9.41□□□□□ -0.9
NR1I3-209ENST00000428574 A0A1W2PQH9 124 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms