RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 KLC2Q9H0B6 622 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 PIDD1Q9HB75 910 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 STYXL1Q9Y6J8 313 aa13.86□□□□□ -0.19
USP42-203ENST00000426246 SORBS2O94875 1100 aaKnown RBP13.85□□□□□ -0.19
USP42-203ENST00000426246 TUBP50607 506 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 WLSQ5T9L3 541 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 BRSK2Q8IWQ3 736 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 PARK7Q99497 189 aaKnown RBP13.85□□□□□ -0.19
USP42-203ENST00000426246 TSC22D3Q99576 134 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 MED10Q9BTT4 135 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 ELOVL4Q9GZR5 314 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 SDCBP2Q9H190 292 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 ATXN2Q99700 1313 aaKnown RBP13.85□□□□□ -0.19
USP42-203ENST00000426246 MED7O43513 233 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 CCDC130P13994 396 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 DESP17661 470 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 BTKQ06187 659 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 FAM183BPQ6ZVS7 135 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 PID1Q7Z2X4 250 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 CMC1Q7Z7K0 106 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 EMID1Q96A84 441 aaPredicted RBP13.85□□□□□ -0.19
USP42-203ENST00000426246 DDX56Q9NY93 547 aaKnown RBP13.85□□□□□ -0.19
USP42-203ENST00000426246 DONSONQ9NYP3 566 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 PRR5-ARHGAP8B1AHC4 643 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 PPEF2O14830 753 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 PEX11AO75192 247 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 ERVK-10P10266 1014 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 GPD1P21695 349 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 PTPN4P29074 926 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 TYK2P29597 1187 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 ARHGAP8P85298 464 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 DCAF6Q58WW2 860 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 ACSBG2Q5FVE4 666 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 RABGAP1LQ5R372 815 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 HEATR6Q6AI08 1181 aaKnown RBP13.85□□□□□ -0.19
USP42-203ENST00000426246 SAPCD2Q86UD0 394 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 ARFGAP1Q8N6T3 406 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 TEX9Q8N6V9 391 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 PEBP4Q96S96 227 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 MIPEPQ99797 713 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 SIK2Q9H0K1 926 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 CXCL16Q9H2A7 254 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 SLC4A7Q9Y6M7 1214 aa13.85□□□□□ -0.19
USP42-203ENST00000426246 APOL1O14791 398 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 AIM2O14862 343 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 PMM2O15305 246 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 ADCY6O43306 1168 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 MAP3K7O43318 606 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 T-ENOLP0DO92 83 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 LGSNQ5TDP6 509 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 C1orf127Q8N9H9 656 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 SNX31Q8N9S9 440 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 MAML3Q96JK9 1138 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 GBP5Q96PP8 586 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 TMEM109Q9BVC6 243 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 NMRK1Q9NWW6 199 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 STOML1Q9UBI4 398 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 STRIP2Q9ULQ0 834 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 DNAJC16Q9Y2G8 782 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.84□□□□□ -0.19
USP42-203ENST00000426246 SRRM3A6NNA2 597 aaPredicted RBP13.84□□□□□ -0.19
USP42-203ENST00000426246 DNAJC6O75061 913 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 ZWINTO95229 277 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 PIGRP01833 764 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 HUNKP57058 714 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 CUL3Q13618 768 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 ZRSR2Q15696 482 aaKnown RBP13.84□□□□□ -0.19
USP42-203ENST00000426246 RNF43Q68DV7 783 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 PTAR1Q7Z6K3 402 aaPredicted RBP13.84□□□□□ -0.19
USP42-203ENST00000426246 C10orf82Q8WW14 230 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 SHOC2Q9UQ13 582 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 STARD13Q9Y3M8 1113 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 SLC4A1P02730 911 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 INSRRP14616 1297 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 CACNB2Q08289 660 aaPredicted RBP13.84□□□□□ -0.19
USP42-203ENST00000426246 USP4Q13107 963 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 STX3Q13277 289 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 TTLL4Q14679 1199 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 SPDYCQ5MJ68 293 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 GSTCDQ8NEC7 633 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 NPLOC4Q8TAT6 608 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 SLC7A6OSQ96CW6 309 aaPredicted RBP13.84□□□□□ -0.19
USP42-203ENST00000426246 MTBPQ96DY7 904 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 OXNAD1Q96HP4 312 aaPredicted RBP13.84□□□□□ -0.19
USP42-203ENST00000426246 TMEM176AQ96HP8 235 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 ACO2Q99798 780 aaKnown RBP13.84□□□□□ -0.19
USP42-203ENST00000426246 CDT1Q9H211 546 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 ATXN3LQ9H3M9 355 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 CAB39LQ9H9S4 337 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 VTA1Q9NP79 307 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 TAS2R1Q9NYW7 299 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 MGAMO43451 1857 aa13.84□□□□□ -0.19
USP42-203ENST00000426246 EVPLQ92817 2033 aa13.83□□□□□ -0.19
USP42-203ENST00000426246 SPECC1L-ADORA2AF8WAN1 911 aa13.83□□□□□ -0.19
USP42-203ENST00000426246 ZC3H11AO75152 810 aaKnown RBP eCLIP13.83□□□□□ -0.19
USP42-203ENST00000426246 IGHA2P01877 340 aa13.83□□□□□ -0.19
USP42-203ENST00000426246 TPBGLP0DKB5 382 aa13.83□□□□□ -0.19
USP42-203ENST00000426246 ABL2P42684 1182 aa13.83□□□□□ -0.19
USP42-203ENST00000426246 KLC1Q07866 573 aa13.83□□□□□ -0.19
USP42-203ENST00000426246 CRYMQ14894 314 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms