RNA–Protein interactions for RNA: ENST00000426217.1

MTND4P28-201, Transcript of MT-ND4 pseudogene 28, humanhuman

BASIC

Gene MTND4P28, Length 387 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTND4P28-201ENST00000426217 KIR2DS5A0A0G2JLQ3 304 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 RPS10-NUDT3A0A1W2PQS6 291 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 SRRM3A6NNA2 597 aaPredicted RBP3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 BTBD18B2RXH4 712 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 KIR2DS3K7RE56 304 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 PRPF4O43172 522 aaKnown RBP eCLIP3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 HOXC6P09630 235 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 CHRNB1P11230 501 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 MTHFSP49914 203 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 GUCY2FP51841 1108 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 ARFIP2P53365 341 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 DLX5P56178 289 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 CRYZQ08257 329 aaKnown RBP3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 CTBP1Q13363 440 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 PGS1Q32NB8 556 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 C9orf57Q5W0N0 161 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 MEX3BQ6ZN04 569 aaKnown RBP3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 ARMC9Q7Z3E5 817 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 KCTD20Q7Z5Y7 419 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 LPAR1Q92633 364 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 EME1Q96AY2 570 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 HES6Q96HZ4 224 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 SEZ6LQ9BYH1 1024 aa3.49□□□□□ -1.85
MTND4P28-201ENST00000426217 A8MVJ9 347 aa3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 CD3EAPO15446 510 aaKnown RBP3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 USP12O75317 370 aa3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 SERPINB2P05120 415 aa3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 HGFP14210 728 aa3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 EVA1CP58658 441 aa3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 COASYQ13057 564 aa3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 FAM50AQ14320 339 aaKnown RBP3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 RBM39Q14498 530 aaKnown RBP3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 CEP85LQ5SZL2 805 aa3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 LMBRD2Q68DH5 695 aaPredicted RBP3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 ZNF449Q6P9G9 518 aa3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 SPSB3Q6PJ21 355 aa3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 ZDHHC24Q6UX98 284 aa3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 FAM83HQ6ZRV2 1179 aaPredicted RBP3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 C16orf82Q7Z2V1 217 aa3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 NPM2Q86SE8 214 aaKnown RBP3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 NT5C1BQ96P26 610 aa3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 C1QTNF5Q9BXJ0 243 aa3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 RIMKLBQ9ULI2 386 aa3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 G3BP2Q9UN86 482 aaKnown RBP3.48□□□□□ -1.85
MTND4P28-201ENST00000426217 PRR23AA6NEV1 266 aa3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 CA12O43570 354 aa3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 TBC1D4O60343 1298 aa3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 SP1P08047 785 aa3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 NPR1P16066 1061 aa3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 TFEBP19484 476 aa3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 ADRA1DP25100 572 aa3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 GALNSP34059 522 aa3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 JAK3P52333 1124 aa3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 WDR5P61964 334 aaKnown RBP3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 Q0VFX4 171 aa3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 CHPFQ8IZ52 775 aa3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 ADGRF4Q8IZF3 695 aa3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 PRR11Q96HE9 360 aaPredicted RBP3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 URB1-AS1Q96HZ7 61 aa3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 INPP4AQ96PE3 977 aaPredicted RBP3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 TRIM54Q9BYV2 358 aa3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 XPNPEP3Q9NQH7 507 aa3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 VPS45Q9NRW7 570 aa3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 HIF1ANQ9NWT6 349 aa3.47□□□□□ -1.85
MTND4P28-201ENST00000426217 KRT2P35908 639 aa3.46□□□□□ -1.86
MTND4P28-201ENST00000426217 KIF5AQ12840 1032 aa3.46□□□□□ -1.86
MTND4P28-201ENST00000426217 DLGAP5Q15398 846 aa3.46□□□□□ -1.86
MTND4P28-201ENST00000426217 CCDC157Q569K6 752 aa3.46□□□□□ -1.86
MTND4P28-201ENST00000426217 FAM71DQ8N9W8 422 aa3.46□□□□□ -1.86
MTND4P28-201ENST00000426217 TMEM174Q8WUU8 243 aa3.46□□□□□ -1.86
MTND4P28-201ENST00000426217 MAML1Q92585 1016 aa3.46□□□□□ -1.86
MTND4P28-201ENST00000426217 MVB12AQ96EY5 273 aa3.46□□□□□ -1.86
MTND4P28-201ENST00000426217 CDK5RAP3Q96JB5 506 aa3.46□□□□□ -1.86
MTND4P28-201ENST00000426217 CGRRF1Q99675 332 aa3.46□□□□□ -1.86
MTND4P28-201ENST00000426217 CDT1Q9H211 546 aa3.46□□□□□ -1.86
MTND4P28-201ENST00000426217 SMURF2Q9HAU4 748 aa3.46□□□□□ -1.86
MTND4P28-201ENST00000426217 SIRT3Q9NTG7 399 aaPredicted RBP3.46□□□□□ -1.86
MTND4P28-201ENST00000426217 SNED1Q8TER0 1413 aa3.45□□□□□ -1.86
MTND4P28-201ENST00000426217 NOTCH2Q04721 2471 aa3.45□□□□□ -1.86
MTND4P28-201ENST00000426217 BTN3A1O00481 513 aa3.45□□□□□ -1.86
MTND4P28-201ENST00000426217 PARP1P09874 1014 aaKnown RBP3.45□□□□□ -1.86
MTND4P28-201ENST00000426217 SOX2P48431 317 aa3.45□□□□□ -1.86
MTND4P28-201ENST00000426217 PCYT1AP49585 367 aa3.45□□□□□ -1.86
MTND4P28-201ENST00000426217 GATMP50440 423 aa3.45□□□□□ -1.86
MTND4P28-201ENST00000426217 CLCN5P51795 746 aa3.45□□□□□ -1.86
MTND4P28-201ENST00000426217 TXNL4AP83876 142 aaKnown RBP3.45□□□□□ -1.86
MTND4P28-201ENST00000426217 ZNF672Q499Z4 452 aaPredicted RBP3.45□□□□□ -1.86
MTND4P28-201ENST00000426217 USP49Q70CQ1 688 aa3.45□□□□□ -1.86
MTND4P28-201ENST00000426217 C11orf44Q8N8P7 122 aa3.45□□□□□ -1.86
MTND4P28-201ENST00000426217 NGDNQ8NEJ9 315 aaKnown RBP3.45□□□□□ -1.86
MTND4P28-201ENST00000426217 WDR83Q9BRX9 315 aaKnown RBP3.45□□□□□ -1.86
MTND4P28-201ENST00000426217 DPH1Q9BZG8 443 aa3.45□□□□□ -1.86
MTND4P28-201ENST00000426217 SDF2L1Q9HCN8 221 aa3.45□□□□□ -1.86
MTND4P28-201ENST00000426217 ZSCAN32Q9NX65 697 aa3.45□□□□□ -1.86
MTND4P28-201ENST00000426217 NKX1-2Q9UD57 310 aaPredicted RBP3.45□□□□□ -1.86
MTND4P28-201ENST00000426217 INAFM1C9JVW0 142 aa3.44□□□□□ -1.86
MTND4P28-201ENST00000426217 RASAL1O95294 804 aa3.44□□□□□ -1.86
MTND4P28-201ENST00000426217 IFNA2P01563 188 aa3.44□□□□□ -1.86
MTND4P28-201ENST00000426217 CDK11BP21127 795 aaKnown RBP3.44□□□□□ -1.86
MTND4P28-201ENST00000426217 KCNJ4P48050 445 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms