RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 KHDRBS3O75525 346 aaKnown RBP13.92□□□□□ -0.18
COL20A1-203ENST00000422202 SCGNO76038 276 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 CEP68Q76N32 757 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 DET1Q7L5Y6 550 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 SEMA4DQ92854 862 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 SEC16BQ96JE7 1060 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 UNKQ9C0B0 810 aaKnown RBP13.92□□□□□ -0.18
COL20A1-203ENST00000422202 A0A087WZ62 844 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 GMFGO60234 142 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 TAF2Q6P1X5 1199 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 EID3Q8N140 333 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 DDHD1Q8NEL9 900 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 TMEM159Q96B96 161 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 BPIFA3Q9BQP9 254 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 AP4E1Q9UPM8 1137 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 SNX13Q9Y5W8 968 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 PTPRTO14522 1441 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 FOSL2P15408 326 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 PLEKHA7Q6IQ23 1121 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 PALB2Q86YC2 1186 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 FAM9CQ8IZT9 166 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 SH2D3CQ8N5H7 860 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 ATXN3LQ9H3M9 355 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 ATG7O95352 703 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 POMCP01189 267 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 COMTP21964 271 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 HPCAL1P37235 193 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 THOP1P52888 689 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 PTSQ03393 145 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 SCRN3Q0VDG4 424 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 SLC18A3Q16572 532 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 TFAP2DQ7Z6R9 452 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 SRBD1Q8N5C6 995 aaKnown RBP13.92□□□□□ -0.18
COL20A1-203ENST00000422202 PHF21BQ96EK2 531 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 PGLYRP2Q96PD5 576 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 PLEKHG1Q9ULL1 1385 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 SF3B1O75533 1304 aaKnown RBP eCLIP13.91□□□□□ -0.183e-6■■■■■ 137.9
COL20A1-203ENST00000422202 TMEM120BA0PK00 339 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 MOXD2PA6NHM9 499 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 IDH3BO43837 385 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 OR10H2O60403 315 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 BAIAP3O94812 1187 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 SERPINH1P50454 418 aaKnown RBP13.91□□□□□ -0.18
COL20A1-203ENST00000422202 SEL1L3Q68CR1 1132 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 TRIM17Q9Y577 477 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 AP4S1Q9Y587 144 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 POM121L1PQ3SYA9 428 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 APOL2Q9BQE5 337 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 CHD1O14646 1710 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 TMEM114B3SHH9 223 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 IFNGR2P38484 337 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 TOB2Q14106 344 aaPredicted RBP13.91□□□□□ -0.18
COL20A1-203ENST00000422202 SPIDRQ14159 915 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 FBXO42Q6P3S6 717 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 RMND5BQ96G75 393 aaPredicted RBP13.91□□□□□ -0.18
COL20A1-203ENST00000422202 CLCC1Q96S66 551 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 PCDHB2Q9Y5E7 798 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 PCDHGA3Q9Y5H0 932 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 EFCAB10A6NFE3 127 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 PEX5P50542 639 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 PPM1LQ5SGD2 360 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 TMC5Q6UXY8 1006 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 CDH24Q86UP0 819 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 ANKRD13AQ8IZ07 590 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 SNRNP27Q8WVK2 155 aaKnown RBP13.91□□□□□ -0.18
COL20A1-203ENST00000422202 FAM111AQ96PZ2 611 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 FICDQ9BVA6 458 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 CELF4Q9BZC1 486 aaKnown RBP13.91□□□□□ -0.18
COL20A1-203ENST00000422202 POLR1BQ9H9Y6 1135 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 MCOLN3Q8TDD5 553 aa13.91□□□□□ -0.18
COL20A1-203ENST00000422202 ZNF70Q9UC06 446 aaPredicted RBP13.91□□□□□ -0.18
COL20A1-203ENST00000422202 MRPL42Q9Y6G3 142 aaKnown RBP13.91□□□□□ -0.18
COL20A1-203ENST00000422202 RBP3P10745 1247 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 OR1E1P30953 314 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 RCVRNP35243 200 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 KCNJ1P48048 391 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 NUP107P57740 925 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 TFDP3Q5H9I0 405 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 C9orf131Q5VYM1 1079 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 KIAA0408Q6ZU52 694 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 TAF8Q7Z7C8 310 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 FAM120BQ96EK7 910 aaKnown RBP13.9□□□□□ -0.18
COL20A1-203ENST00000422202 FLT1P17948 1338 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 ITSN1Q15811 1721 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 CCDC154A6NI56 674 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 HSPA13P48723 471 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 GLT6D1Q7Z4J2 308 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 TARS2Q9BW92 718 aaKnown RBP13.9□□□□□ -0.18
COL20A1-203ENST00000422202 OSBPL5Q9H0X9 879 aaPredicted RBP13.9□□□□□ -0.18
COL20A1-203ENST00000422202 SUCOQ9UBS9 1254 aaKnown RBP13.9□□□□□ -0.18
COL20A1-203ENST00000422202 ZNHIT2Q9UHR6 403 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 GPSM3Q9Y4H4 160 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 RAD54BQ9Y620 910 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 VPS4BO75351 444 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 MFN2O95140 757 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 POLR2EP19388 210 aaKnown RBP13.9□□□□□ -0.18
COL20A1-203ENST00000422202 GMPSP49915 693 aaPredicted RBP13.9□□□□□ -0.18
COL20A1-203ENST00000422202 FAAH2Q6GMR7 532 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 CHP1Q99653 195 aa13.9□□□□□ -0.18
COL20A1-203ENST00000422202 NIF3L1Q9GZT8 377 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms