RNA–Protein interactions for RNA: ENST00000419020.1

DDX39B-205, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-205ENST00000419020 LHX5Q9H2C1 402 aa12.29□□□□□ -0.44
DDX39B-205ENST00000419020 CCSER2Q9H7U1 834 aa12.29□□□□□ -0.44
DDX39B-205ENST00000419020 CRTAC1Q9NQ79 661 aa12.29□□□□□ -0.44
DDX39B-205ENST00000419020 MYH11P35749 1972 aa12.29□□□□□ -0.44
DDX39B-205ENST00000419020 CSO75390 466 aaKnown RBP12.28□□□□□ -0.44
DDX39B-205ENST00000419020 EPHX1P07099 455 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 LMO2P25791 158 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 PSMA5P28066 241 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 ARRB1P49407 418 aaPredicted RBP12.28□□□□□ -0.44
DDX39B-205ENST00000419020 NCKAP1LP55160 1127 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 CYP27A1Q02318 531 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 CLN3Q13286 438 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 ZNF234Q14588 700 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 IGFBP7Q16270 282 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 GEN1Q17RS7 908 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 SOWAHAQ2M3V2 549 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 HECTD3Q5T447 861 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 IGF2-ASQ6U949 168 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 HTR3DQ70Z44 454 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 CCDC97Q96F63 343 aaPredicted RBP12.28□□□□□ -0.44
DDX39B-205ENST00000419020 PCED1BQ96HM7 432 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 C8orf48Q96LL4 319 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 DEPDC7Q96QD5 511 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 SYT15Q9BQS2 421 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 TIPINQ9BVW5 301 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 LRRC4CQ9HCJ2 640 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 GDF3Q9NR23 364 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 TMEM30AQ9NV96 361 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 PLK2Q9NYY3 685 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 FBXO10Q9UK96 956 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 AGAP1Q9UPQ3 857 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 SNX9Q9Y5X1 595 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 CACNA1DQ01668 2161 aa12.28□□□□□ -0.44
DDX39B-205ENST00000419020 A0A1W2PNU3 283 aaPredicted RBP12.27□□□□□ -0.45
DDX39B-205ENST00000419020 OPA1O60313 960 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 ITGB3P05106 788 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 ITGB2P05107 769 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 SFTPCP11686 197 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 CACNA2D1P54289 1103 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 MFAP3P55082 362 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 FOXK1P85037 733 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 SGO2Q562F6 1265 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 RUFY3Q7L099 469 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 KCNK18Q7Z418 384 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 DIS3L2Q8IYB7 885 aaKnown RBP12.27□□□□□ -0.45
DDX39B-205ENST00000419020 TOP6BLQ8N6T0 577 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 OR2T3Q8NH03 318 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 SNX29Q8TEQ0 813 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 KCNN1Q92952 543 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 SKA1Q96BD8 255 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 SLC46A1Q96NT5 459 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 CCNL2Q96S94 520 aaPredicted RBP12.27□□□□□ -0.45
DDX39B-205ENST00000419020 EPN3Q9H201 632 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 EBF2Q9HAK2 575 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 GDAP2Q9NXN4 497 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 ORC3Q9UBD5 711 aaPredicted RBP12.27□□□□□ -0.45
DDX39B-205ENST00000419020 CHORDC1Q9UHD1 332 aaPredicted RBP12.27□□□□□ -0.45
DDX39B-205ENST00000419020 CDH9Q9ULB4 789 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 SATB2Q9UPW6 733 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 SLC27A6Q9Y2P4 619 aa12.27□□□□□ -0.45
DDX39B-205ENST00000419020 A0A1W2PPC4 97 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 H0YCG3 227 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 TRIM38O00635 465 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 WNT9AO14904 365 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 SIGLEC6O43699 453 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 CTDNEP1O95476 244 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 C7P10643 843 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 FDPSP14324 419 aaKnown RBP12.26□□□□□ -0.45
DDX39B-205ENST00000419020 YWHAQP27348 245 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 RBMS1P29558 406 aaKnown RBP12.26□□□□□ -0.45
DDX39B-205ENST00000419020 AFMP43652 599 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 FXR2P51116 673 aaKnown RBP eCLIP12.26□□□□□ -0.45
DDX39B-205ENST00000419020 ASIC1P78348 528 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 MAPRE1Q15691 268 aaKnown RBP12.26□□□□□ -0.45
DDX39B-205ENST00000419020 ZNF174Q15697 407 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 C3orf38Q5JPI3 329 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 KIAA0895LQ68EN5 471 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 C1orf127Q8N9H9 656 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 PDZD8Q8NEN9 1154 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 UCMAQ8WVF2 138 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 KBTBD7Q8WVZ9 684 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 SORCS1Q8WY21 1168 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 FBXO32Q969P5 355 aa12.26□□□□□ -0.45
DDX39B-205ENST00000419020 PLEKHB1Q9UF11 243 aaPredicted RBP12.26□□□□□ -0.45
DDX39B-205ENST00000419020 POLQO75417 2590 aa12.25□□□□□ -0.45
DDX39B-205ENST00000419020 CSMD1Q96PZ7 3565 aa12.25□□□□□ -0.45
DDX39B-205ENST00000419020 A0A1W2PR77 199 aa12.25□□□□□ -0.45
DDX39B-205ENST00000419020 TISP43B9A030 160 aa12.25□□□□□ -0.45
DDX39B-205ENST00000419020 PPFIA2O75334 1257 aa12.25□□□□□ -0.45
DDX39B-205ENST00000419020 PLCG1P19174 1290 aa12.25□□□□□ -0.45
DDX39B-205ENST00000419020 CD38P28907 300 aa12.25□□□□□ -0.45
DDX39B-205ENST00000419020 RXRGP48443 463 aa12.25□□□□□ -0.45
DDX39B-205ENST00000419020 TUBP50607 506 aa12.25□□□□□ -0.45
DDX39B-205ENST00000419020 INHBCP55103 352 aa12.25□□□□□ -0.45
DDX39B-205ENST00000419020 WNT7BP56706 349 aa12.25□□□□□ -0.45
DDX39B-205ENST00000419020 CAMK2GQ13555 558 aaPredicted RBP12.25□□□□□ -0.45
DDX39B-205ENST00000419020 SNX30Q5VWJ9 437 aa12.25□□□□□ -0.45
DDX39B-205ENST00000419020 SERPINA13PQ6UXR4 307 aa12.25□□□□□ -0.45
DDX39B-205ENST00000419020 LRRC52Q8N7C0 313 aa12.25□□□□□ -0.45
DDX39B-205ENST00000419020 RBBP8NLQ8NC74 664 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms