RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 RTKNQ9BST9 563 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 GCOM2Q9BZD3 368 aaPredicted RBP8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 PAIP1Q9H074 479 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 C10orf88Q9H8K7 445 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 SAE1Q9UBE0 346 aaPredicted RBP8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 TTLL3Q9Y4R7 772 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 GPC6Q9Y625 555 aaPredicted RBP8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 PRSS51A0A1B0GVH4 220 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 K7EPI3 171 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 XPO1O14980 1071 aaKnown RBP8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 MAFGO15525 162 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 XPOTO43592 962 aaKnown RBP8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 LYPLA1O75608 230 aaPredicted RBP8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 NDST2P52849 883 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 RPL7AP62424 266 aaKnown RBP8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 ZNF252P-AS1Q0IIN9 211 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 MBLAC2Q68D91 279 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 TXNRD3NBQ6F5E7 133 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 NIPAL1Q6NVV3 410 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 FASTKD5Q7L8L6 764 aaKnown RBP8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 CENPSQ8N2Z9 138 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 PHTF2Q8N3S3 785 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 PPP1R14CQ8TAE6 165 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 CHPT1Q8WUD6 406 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 RSAD2Q8WXG1 361 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 ISOC1Q96CN7 298 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 TSPAN18Q96SJ8 248 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 PKP2Q99959 881 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 HEPHQ9BQS7 1158 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 WDR18Q9BV38 432 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 AMNQ9BXJ7 453 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 FRMD8P1Q9BZ68 369 aaPredicted RBP8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 TRPC7Q9HCX4 862 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 TOPORSQ9NS56 1045 aaPredicted RBP8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 EPS15L1Q9UBC2 864 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 HESX1Q9UBX0 185 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 H0YJX3 145 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 TOM1L1O75674 476 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 ZMPSTE24O75844 475 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 P4HBP07237 508 aaKnown RBP8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 CFHP08603 1231 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 BASP1P80723 227 aaKnown RBP8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 C1QBPQ07021 282 aaKnown RBP8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 FLOT2Q14254 428 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 THOC7Q6I9Y2 204 aaKnown RBP8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 NDUFAF2Q8N183 169 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 ACSF2Q96CM8 615 aaPredicted RBP8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 MMP19Q99542 508 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 SERPINI1Q99574 410 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 DDX56Q9NY93 547 aaKnown RBP8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 EBF1Q9UH73 591 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 MYRFQ9Y2G1 1151 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 TSC22D4Q9Y3Q8 395 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 SCN9AQ15858 1988 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 TMEM191CA6NGB0 347 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 CXorf49A8MYA2 514 aaPredicted RBP8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 ZC3H11AO75152 810 aaKnown RBP eCLIP8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 BMP10O95393 424 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 GSRP00390 522 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 TMEM191BP0C7N4 346 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 ZNF26P17031 533 aaPredicted RBP8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 CDH3P22223 829 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 SLC1A6P48664 564 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 GTF2BQ00403 316 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 FASTKD1Q53R41 847 aaKnown RBP8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 DCAF6Q58WW2 860 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 PADI6Q6TGC4 694 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 SV2AQ7L0J3 742 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 RSPH3Q86UC2 560 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 CARM1Q86X55 608 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 HM13Q8TCT9 377 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 POMGNT1Q8WZA1 660 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 PI4K2AQ9BTU6 479 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 BCAP29Q9UHQ4 241 aa8.28□□□□□ -1.08
HMGXB4-202ENST00000418170 SERPINB2P05120 415 aa8.27□□□□□ -1.08
HMGXB4-202ENST00000418170 INHBBP09529 407 aa8.27□□□□□ -1.08
HMGXB4-202ENST00000418170 C21orf59P57076 290 aa8.27□□□□□ -1.08
HMGXB4-202ENST00000418170 CBLBQ13191 982 aa8.27□□□□□ -1.08
HMGXB4-202ENST00000418170 BMPR2Q13873 1038 aa8.27□□□□□ -1.08
HMGXB4-202ENST00000418170 CLPPQ16740 277 aaPredicted RBP8.27□□□□□ -1.08
HMGXB4-202ENST00000418170 TMEM102Q8N9M5 508 aaPredicted RBP8.27□□□□□ -1.08
HMGXB4-202ENST00000418170 GRIN3AQ8TCU5 1115 aa8.27□□□□□ -1.08
HMGXB4-202ENST00000418170 TMC2Q8TDI7 906 aa8.27□□□□□ -1.08
HMGXB4-202ENST00000418170 DLG3Q92796 817 aa8.27□□□□□ -1.08
HMGXB4-202ENST00000418170 C12orf43Q96C57 262 aaKnown RBP8.27□□□□□ -1.08
HMGXB4-202ENST00000418170 HIPK3Q9H422 1215 aa8.27□□□□□ -1.08
HMGXB4-202ENST00000418170 C1orf112Q9NSG2 853 aa8.27□□□□□ -1.08
HMGXB4-202ENST00000418170 TRNAU1APQ9NX07 287 aaKnown RBP8.27□□□□□ -1.08
HMGXB4-202ENST00000418170 CROTQ9UKG9 612 aa8.27□□□□□ -1.08
HMGXB4-202ENST00000418170 SLX4Q8IY92 1834 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 C3orf70A6NLC5 250 aaPredicted RBP8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 F8VP50 259 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 ZNF195O14628 629 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 DCXO43602 365 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 KRT38O76015 456 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 ZBTB11O95625 1053 aaPredicted RBP8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 FGF3P11487 239 aaPredicted RBP8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 NCF2P19878 526 aaPredicted RBP8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 PRKCHP24723 683 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 NANOGP8Q6NSW7 305 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms