RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 DYNC1I1O14576 645 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 XPO1O14980 1071 aaKnown RBP13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 XYLBO75191 536 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 TKTP29401 623 aaKnown RBP13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 HOXA9P31269 272 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 MAN1A1P33908 653 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 GSCP56915 257 aaPredicted RBP13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 RWDD2BP57060 319 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 MAP3K7CLP57077 242 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 PRKCQQ04759 706 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 ELAVL2Q12926 359 aaKnown RBP13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 MAPRE1Q15691 268 aaKnown RBP13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 CCDC142Q17RM4 750 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 ERCC6LQ2NKX8 1250 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 ZNF528Q3MIS6 628 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 INTS6LQ5JSJ4 861 aaKnown RBP13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 FAM35AQ86V20 835 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 SLC7A14Q8TBB6 771 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 HSFY1Q96LI6 401 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 NAP1L3Q99457 506 aaPredicted RBP13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 HCFC1R1Q9NWW0 138 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 EHD2Q9NZN4 543 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 NCDNQ9UBB6 729 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 FBXO4Q9UKT5 387 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 PCDHA3Q9Y5H8 950 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 MIA3Q5JRA6 1907 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 SPTBN2O15020 2390 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 TCRBV5S1A1TA0A578 114 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 SYN3O14994 580 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 GRAP2O75791 330 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 CTNNA1P35221 906 aaKnown RBP13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 RFC1P35251 1148 aaPredicted RBP13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 CETN2P41208 172 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 PLA2G4AP47712 749 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 SLC6A3Q01959 620 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 CSTF1Q05048 431 aaKnown RBP13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 C2orf54Q08AI8 447 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 ZNF211Q13398 564 aaPredicted RBP13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 NAA30Q147X3 362 aaPredicted RBP13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 ELF2Q15723 593 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 VARS2Q5ST30 1063 aaKnown RBP13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 CC2D1AQ6P1N0 951 aaPredicted RBP13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 C4orf50Q6ZRC1 276 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 TMEM110Q86TL2 294 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 ZDHHC17Q8IUH5 632 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 SPATA2LQ8IUW3 424 aaPredicted RBP13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 SCUBE3Q8IX30 993 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 NPAS3Q8IXF0 933 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 RHOT1Q8IXI2 618 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 DCP1BQ8IZD4 617 aaKnown RBP13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 SIX6OS1Q8N1H7 587 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 EMC1Q8N766 993 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 JOSD2Q8TAC2 188 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 ING5Q8WYH8 240 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 KRT35Q92764 455 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 MYLPFQ96A32 169 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 SMARCD1Q96GM5 515 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 PCED1BQ96HM7 432 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 CARD9Q9H257 536 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 LTB4R2Q9NPC1 389 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 ASNSD1Q9NWL6 643 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 EPG5Q9HCE0 2579 aa13.76□□□□□ -0.21
HLA-DMB-258ENST00000418107 TPRP12270 2363 aaKnown RBP13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 PSTPIP1O43586 416 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 RNF8O76064 485 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 PDGFRAP16234 1089 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 GPD1P21695 349 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 OR1D2P34982 312 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 MARCKSL1P49006 195 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 PFKPQ01813 784 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 RAB33AQ14088 237 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 HADHQ16836 314 aaKnown RBP13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 LONRF2Q1L5Z9 754 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 CTXN3Q4LDR2 81 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 PABPC1LQ4VXU2 614 aaKnown RBP13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 PPP1R15BQ5SWA1 713 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 RSRC2Q7L4I2 434 aaKnown RBP13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 PIGZQ86VD9 579 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 CCDC50Q8IVM0 306 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 SPATA4Q8NEY3 305 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 ACTRT1Q8TDG2 376 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 ALG3Q92685 438 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 CD101Q93033 1021 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 OSBPL6Q9BZF3 934 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 DNMT3BQ9UBC3 853 aaKnown RBP13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 CACNA1BQ00975 2339 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 PTPRDP23468 1912 aa13.75□□□□□ -0.21
HLA-DMB-258ENST00000418107 F8VP50 259 aa13.74□□□□□ -0.21
HLA-DMB-258ENST00000418107 H7C4K7 107 aa13.74□□□□□ -0.21
HLA-DMB-258ENST00000418107 KRIT1O00522 736 aa13.74□□□□□ -0.21
HLA-DMB-258ENST00000418107 PAPSS1O43252 624 aaPredicted RBP13.74□□□□□ -0.21
HLA-DMB-258ENST00000418107 FGGP02679 453 aa13.74□□□□□ -0.21
HLA-DMB-258ENST00000418107 POU2F2P09086 479 aa13.74□□□□□ -0.21
HLA-DMB-258ENST00000418107 RHOXF2BP0C7M4 288 aa13.74□□□□□ -0.21
HLA-DMB-258ENST00000418107 BDNFP23560 247 aa13.74□□□□□ -0.21
HLA-DMB-258ENST00000418107 TARSP26639 723 aaKnown RBP13.74□□□□□ -0.21
HLA-DMB-258ENST00000418107 PEX5P50542 639 aa13.74□□□□□ -0.21
HLA-DMB-258ENST00000418107 ADIGQ0VDE8 80 aa13.74□□□□□ -0.21
HLA-DMB-258ENST00000418107 SLC39A12Q504Y0 691 aa13.74□□□□□ -0.21
HLA-DMB-258ENST00000418107 EFHC1Q5JVL4 640 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms