RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 SHC3Q92529 594 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 TLCD1Q96CP7 247 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 TSPAN17Q96FV3 270 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 HSD17B14Q9BPX1 270 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 SPATA31A1Q5TZJ5 1347 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 SPDYE5A6NIY4 337 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 PRR5-ARHGAP8B1AHC4 643 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 ARHGAP8P85298 464 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 SPDYE7PQ495Y7 208 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 ZDHHC24Q6UX98 284 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 ZBTB49Q6ZSB9 765 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 STRA8Q7Z7C7 330 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 TMCO5AQ8N6Q1 288 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 TRAPPC12Q8WVT3 735 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 MMP19Q99542 508 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 VPS33BQ9H267 617 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 TMEM245Q9H330 911 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 RNPEPQ9H4A4 650 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 CYLDQ9NQC7 956 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 SCN3BQ9NY72 215 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 USE1Q9NZ43 259 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 FAM95CA0A1B0GW59 222 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 TM9SF1O15321 606 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 DYNC1LI2O43237 492 aaPredicted RBP13.26□□□□□ -0.29
SCN1B-202ENST00000415950 CXCL8P10145 99 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 PEX6Q13608 980 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 BOLA3Q53S33 107 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 PLEKHM3Q6ZWE6 761 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 SAMD7Q7Z3H4 446 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 CERS5Q8N5B7 392 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 PPP2R3CQ969Q6 453 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 PAWRQ96IZ0 340 aaKnown RBP13.26□□□□□ -0.29
SCN1B-202ENST00000415950 PDCD2LQ9BRP1 358 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 CORO1CQ9ULV4 474 aaPredicted RBP13.26□□□□□ -0.29
SCN1B-202ENST00000415950 CHKBQ9Y259 395 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 WASF2Q9Y6W5 498 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 WDR27A2RRH5 827 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 C5orf58C9J3I9 102 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 OCM2P0CE71 109 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 OCMP0CE72 109 aaPredicted RBP13.26□□□□□ -0.29
SCN1B-202ENST00000415950 FAM200BP0CF97 657 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 SLC1A6P48664 564 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 MAPRE1Q15691 268 aaKnown RBP13.26□□□□□ -0.29
SCN1B-202ENST00000415950 BNC2Q6ZN30 1099 aaPredicted RBP13.26□□□□□ -0.29
SCN1B-202ENST00000415950 SETD3Q86TU7 594 aaPredicted RBP13.26□□□□□ -0.29
SCN1B-202ENST00000415950 TNS4Q8IZW8 715 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 PCDH20Q8N6Y1 951 aaKnown RBP13.26□□□□□ -0.29
SCN1B-202ENST00000415950 PPP1R13LQ8WUF5 828 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 SIKE1Q9BRV8 207 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 ATXN3LQ9H3M9 355 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 ZNF556Q9HAH1 456 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 DDIT4Q9NX09 232 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 TNS2Q63HR2 1409 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 FRMPD4Q14CM0 1322 aa13.26□□□□□ -0.29
SCN1B-202ENST00000415950 A0A0B4J269 797 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 PYGLP06737 847 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 NNMTP40261 264 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 PTRHD1Q6GMV3 140 aaKnown RBP13.25□□□□□ -0.29
SCN1B-202ENST00000415950 SNX32Q86XE0 403 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 SLC44A2Q8IWA5 706 aaPredicted RBP13.25□□□□□ -0.29
SCN1B-202ENST00000415950 OR5B17Q8NGF7 314 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 APOPT1Q96IL0 206 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 IL1RAPL1Q9NZN1 696 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 NKX1-2Q9UD57 310 aaPredicted RBP13.25□□□□□ -0.29
SCN1B-202ENST00000415950 SRRM3A6NNA2 597 aaPredicted RBP13.25□□□□□ -0.29
SCN1B-202ENST00000415950 LIASO43766 372 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 ASMTLO95671 621 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 THRAP10827 490 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 ITGB5P18084 799 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 PPP3CCP48454 512 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 PPIDQ08752 370 aaKnown RBP13.25□□□□□ -0.29
SCN1B-202ENST00000415950 ATP1A4Q13733 1029 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 OTUD3Q5T2D3 398 aaPredicted RBP13.25□□□□□ -0.29
SCN1B-202ENST00000415950 DCAF12L1Q5VU92 463 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 EFCAB12Q6NXP0 572 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 UNC45BQ8IWX7 931 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 PHF21BQ96EK2 531 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 ZMYND8Q9ULU4 1186 aaPredicted RBP13.25□□□□□ -0.29
SCN1B-202ENST00000415950 RUVBL2Q9Y230 463 aaKnown RBP13.25□□□□□ -0.29
SCN1B-202ENST00000415950 MYH8P13535 1937 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 RHOBTB1O94844 696 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 ACO1P21399 889 aaKnown RBP13.25□□□□□ -0.29
SCN1B-202ENST00000415950 DEFA1P59665 94 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 DEFA3P59666 94 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 DPYSL3Q14195 570 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 BLOC1S5Q8TDH9 187 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 TMC2Q8TDI7 906 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 IARS2Q9NSE4 1012 aaKnown RBP13.25□□□□□ -0.29
SCN1B-202ENST00000415950 UTP6Q9NYH9 597 aaKnown RBP13.25□□□□□ -0.29
SCN1B-202ENST00000415950 M0QYT0 321 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 SPTLC1O15269 473 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 GSC2O15499 205 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 PSMD10O75832 226 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 POU4F1Q01851 419 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 MCL1Q07820 350 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 ZNF268Q14587 947 aaPredicted RBP13.25□□□□□ -0.29
SCN1B-202ENST00000415950 GALNTL6Q49A17 601 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 ACBD5Q5T8D3 534 aaPredicted RBP13.25□□□□□ -0.29
SCN1B-202ENST00000415950 SPATA2LQ8IUW3 424 aaPredicted RBP13.25□□□□□ -0.29
SCN1B-202ENST00000415950 DCUN1D1Q96GG9 259 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms